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dustspec.split("'")[1].split("_") fails with decoy contigs #49

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wdecoster opened this issue Oct 14, 2021 · 1 comment
Open

dustspec.split("'")[1].split("_") fails with decoy contigs #49

wdecoster opened this issue Oct 14, 2021 · 1 comment

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@wdecoster
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wdecoster commented Oct 14, 2021 •
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[chrom, start_ins, end_ins] = dustspec.split("'")[1].split("_") in vcfy() doesn't work with chromosomes like 'chr1_KI270706v1_random`

This results in a ValueError: too many values to unpack.
@wdecoster
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I am now "silencing" this error by removing all chromosomes with a _, but this is not a permanent solution and should be handled in vcfy().

wdecoster added a commit that referenced this issue Oct 14, 2021
@wdecoster
exclude chromosomes with a '_'
717492e 
this prevents the problem in 
#49 but is 
not a good solution
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