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bonus: add parallelization #19

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wdecoster opened this issue Oct 12, 2021 · 0 comments
Open

bonus: add parallelization #19

wdecoster opened this issue Oct 12, 2021 · 0 comments

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@wdecoster
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to speed things up we can split the data per chromosome and run these things in separate threads/processes

I would use concurrent.futures ThreadPoolExecutor or ProcessPoolExecutor - not sure which one is the fastest, and replace the for loop over the chromosomes
wdecoster added a commit that referenced this issue Oct 14, 2021
@wdecoster
heavily refactoring and implementation of parallelization
453fb34 
solves #19

also addresses 
#35
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@wdecoster