Skip to content

Commit

Permalink
docs: update xslt file to generate the fhir bundle to add consent and…
Browse files Browse the repository at this point in the history 
… organization resources tech-by-design#947
  • Loading branch information
@cibijacob
cibijacob committed Jan 6, 2025
1 parent 8d99207 commit e34c14d
Show file tree
Hide file tree
Showing 2 changed files with 204 additions and 87 deletions.
151 changes: 132 additions & 19 deletions support/specifications/ccda/cda-fhir-bundle.xslt
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,20 +6,23 @@
<xsl:output method="text"/>

<!-- Root template -->
<xsl:param name="currentTimestamp"/>
<xsl:variable name="concentResourceId" select="generate-id(/)"/>
<xsl:variable name="patientResourceId" select="//ccda:patientRole/ccda:id/ccda:extension"/>
<xsl:variable name="patientResourceName" select="//ccda:patientRole/ccda:patient/ccda:name/ccda:family | //ccda:patientRole/ccda:patient/ccda:name/ccda:given"/>

<xsl:template match="/">
{
"resourceType": "Bundle",
"type": "collection",
<!-- "entry": [
<xsl:apply-templates select="//ccda:patientRole"/>
<xsl:apply-templates select="//ccda:encompassingEncounter"/>
<xsl:for-each select="//ccda:observation">
<xsl:apply-templates select="."/>
<xsl:if test="position() != last()">,</xsl:if>
</xsl:for-each>
] -->
"id": "<xsl:value-of select='generate-id()'/>",
"meta" : {
"lastUpdated" : "<xsl:value-of select='$currentTimestamp'/>",
"profile" : ["http://shinny.org/us/ny/hrsn/StructureDefinition/SHINNYBundleProfile"]
},
"type" : "transaction", <!--"type": "collection", -->
"timestamp" : "<xsl:value-of select='$currentTimestamp'/>",
"entry": [
<xsl:apply-templates select="//ccda:patientRole | //ccda:encompassingEncounter | //ccda:observation"/>
<xsl:apply-templates select="//ccda:patientRole | //ccda:encompassingEncounter | //ccda:observation | //ccda:location | //ccda:consent | //ccda:author"/>
]
}
</xsl:template>
Expand All @@ -28,9 +31,15 @@
<xsl:template match="ccda:patientRole">
<xsl:if test="position() > 1">,</xsl:if>
{
"fullUrl" : "http://shinny.org/us/ny/hrsn/Patient/<xsl:value-of select="ccda:id/ccda:extension"/>",
"resource": {
"resourceType": "Patient",
"id": "<xsl:value-of select="ccda:id/ccda:root"/>",
"id": "<xsl:value-of select="ccda:id/ccda:extension"/>",
"meta" : {
"lastUpdated" : "<xsl:value-of select='$currentTimestamp'/>",
"profile" : ["http://shinny.org/us/ny/hrsn/StructureDefinition/shinny-patient"]
},
"language" : "<xsl:value-of select="ccda:patient/ccda:languageCommunication/ccda:languageCode/ccda:code"/>",
"name": [
{
"use": "official",
Expand Down Expand Up @@ -83,23 +92,23 @@
],
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/patient-race",
"url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race",
"valueCodeableConcept": {
"coding": [
{
"system": "<xsl:value-of select="ccda:patient/ccda:raceCode/ccda:codeSystem"/>",
"system": "urn:oid:<xsl:value-of select="ccda:patient/ccda:raceCode/ccda:codeSystem"/>",
"code": "<xsl:value-of select="ccda:patient/ccda:raceCode/ccda:code"/>",
"display": "<xsl:value-of select="ccda:patient/ccda:raceCode/ccda:displayName"/>"
}
]
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/patient-ethnicity",
"url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity",
"valueCodeableConcept": {
"coding": [
{
"system": "<xsl:value-of select="ccda:patient/ccda:ethnicGroupCode/ccda:codeSystem"/>",
"system": "urn:oid:<xsl:value-of select="ccda:patient/ccda:ethnicGroupCode/ccda:codeSystem"/>",
"code": "<xsl:value-of select="ccda:patient/ccda:ethnicGroupCode/ccda:code"/>",
"display": "<xsl:value-of select="ccda:patient/ccda:ethnicGroupCode/ccda:displayName"/>"
}
Expand All @@ -119,6 +128,10 @@
}
}
]
},
"request" : {
"method" : "POST",
"url" : "http://shinny.org/us/ny/hrsn/Patient/<xsl:value-of select="ccda:id/ccda:extension"/>"
}
}
</xsl:template>
Expand All @@ -127,9 +140,14 @@
<xsl:template match="ccda:encompassingEncounter">
<xsl:if test="position() > 1">,</xsl:if>
{
"fullUrl" : "http://shinny.org/us/ny/hrsn/Encounter/<xsl:value-of select="ccda:id/ccda:extension"/>",
"resource": {
"resourceType": "Encounter",
"id": "<xsl:value-of select="ccda:id/ccda:extension"/>",
"meta" : {
"lastUpdated" : "<xsl:value-of select='$currentTimestamp'/>",
"profile" : ["http://shinny.org/us/ny/hrsn/StructureDefinition/shinny-encounter"]
},
"status": "finished",
"type": [
{
Expand All @@ -146,6 +164,93 @@
"start": "<xsl:value-of select="ccda:effectiveTime/ccda:low/ccda:value"/>",
"end": "<xsl:value-of select="ccda:effectiveTime/ccda:high/ccda:value"/>"
}
},
"request" : {
"method" : "POST",
"url" : "http://shinny.org/us/ny/hrsn/Encounter/<xsl:value-of select="ccda:id/ccda:extension"/>"
}
}
</xsl:template>

<!-- Consent Template -->
<xsl:template match="ccda:consent">
<xsl:if test="position() > 1">,</xsl:if>
{
"fullUrl" : "http://shinny.org/us/ny/hrsn/Consent/<xsl:value-of select='$concentResourceId'/>",
"resource": {
"resourceType": "Consent",
"id": "<xsl:value-of select='$concentResourceId'/>",
"meta" : {
"lastUpdated" : "<xsl:value-of select='$currentTimestamp'/>",
"profile" : ["http://shinny.org/us/ny/hrsn/StructureDefinition/shinny-Consent"]
},
"status": "<xsl:value-of select="ccda:statusCode/ccda:code"/>",
"category": [
{
"coding": [
{
"system": "<xsl:value-of select="ccda:code/ccda:codeSystem"/>", <!--"http://loinc.org",-->
"code": "<xsl:value-of select="ccda:code/ccda:code"/>",
"display": "<xsl:value-of select="ccda:code/ccda:displayName"/>"
}
]
}
],
"subject" : {
"reference" : "Patient/<xsl:value-of select='$patientResourceId'/>"
"display" : "<xsl:value-of select='$patientResourceName'/>"
},
"organization" : [{
"reference" : "Organization/<xsl:value-of select='//ccda:assignedAuthor/ccda:representedOrganization/ccda:id/ccda:extension'/>"
}],
},
"request" : {
"method" : "POST",
"url" : "http://shinny.org/us/ny/hrsn/Consent/<xsl:value-of select='$concentResourceId'/>"
}
}
</xsl:template>

<!-- Organization Template -->
<xsl:template match="ccda:author">
<xsl:if test="position() > 1">,</xsl:if>
{
"fullUrl" : "http://shinny.org/us/ny/hrsn/Organization/<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:id/ccda:extension"/>",
"resource": {
"resourceType": "Organization",
"id": "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:id/ccda:extension"/>",
"meta" : {
"lastUpdated" : "<xsl:value-of select='$currentTimestamp'/>",
"profile" : ["http://shinny.org/us/ny/hrsn/StructureDefinition/shin-ny-organization"]
},
"active": true,
"identifier": [
{
"type" : {
"coding": [
{
"display": "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:name"/>"
}
]
},
"system" : "http://www.scn.ny.gov/",
"value" : "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:id/ccda:extension"/>"
}
],
"name" : "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:name"/>",
"address" : [{
"text" : "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:streetAddressLine"/>, <xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:city"/>, <xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:state"/> <xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:postalCode"/>",
"line" : ["<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:streetAddressLine"/>"],
"city" : "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:city"/>",
"district" : "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:county"/>",
"state" : "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:state"/>",
"postalCode" : "<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:addr/ccda:postalCode"/>"
}]
},

"request" : {
"method" : "POST",
"url" : "http://shinny.org/us/ny/hrsn/Organization/<xsl:value-of select="ccda:assignedAuthor/ccda:representedOrganization/ccda:id/ccda:extension"/>"
}
}
</xsl:template>
Expand All @@ -154,9 +259,14 @@
<xsl:template match="ccda:observation">
<xsl:if test="position() > 1">,</xsl:if>
{
"fullUrl" : "http://shinny.org/us/ny/hrsn/Observation/<xsl:value-of select='normalize-space(ccda:id)'/>",
"resource": {
"resourceType": "Observation",
"id": "<xsl:value-of select='normalize-space(ccda:id)'/>",
"meta" : {
"lastUpdated" : "<xsl:value-of select='$currentTimestamp'/>",
"profile" : ["http://shinny.org/us/ny/hrsn/StructureDefinition/shinny-observation-screening-response"]
},
"status": "<xsl:value-of select='ccda:statusCode/ccda:code'/>",
"code": {
"coding": [
Expand All @@ -171,15 +281,15 @@
"subject": {
"reference": "Patient/<xsl:value-of select='ancestor::ccda:ClinicalDocument/ccda:recordTarget/ccda:patientRole/ccda:id/ccda:root'/>"
},
"category": {
"category": [{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/observation-category",
"code": "<xsl:value-of select='ccda:code/ccda:code'/>",
"display": "<xsl:value-of select='ccda:code/ccda:displayName'/>"
}
]
},
}],
<!-- "effectiveDateTime": "<xsl:value-of select='ccda:effectiveTime/ccda:value'/>" -->
"effectiveDateTime": "<xsl:choose>
<xsl:when test='string-length(ccda:effectiveTime/ccda:value) > 14'>
Expand All @@ -204,9 +314,12 @@
<xsl:value-of select='ccda:effectiveTime/ccda:value'/>
</xsl:otherwise>
</xsl:choose>"
},
"request" : {
"method" : "POST",
"url" : "http://shinny.org/us/ny/hrsn/Observation/<xsl:value-of select='normalize-space(ccda:id)'/>"
}
}
<!-- <xsl:if test="position() != last()">,</xsl:if> -->
</xsl:template>

</xsl:stylesheet>
</xsl:stylesheet>
Loading

0 comments on commit e34c14d

Please sign in to comment.