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Bumped python version and added python alias
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andrew committed May 28, 2021
1 parent 9f46e69 commit f2d492b
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4 changes: 3 additions & 1 deletion Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ FROM ubuntu:20.10
ENV DEBIAN_FRONTEND=noninteractive

RUN apt-get update \
&& apt-get install -y git python3-pip python3.6 \
&& apt-get install -y git python3-pip python3.8 \
&& apt-get install -y openslide-tools

# uncomment:
Expand All @@ -21,6 +21,8 @@ RUN apt-get update \
#ENV LANGUAGE pl_PL
#ENV LC_ALL pl_PL.UTF-8

RUN update-alternatives --install /usr/bin/python python /usr/bin/python3 0

RUN cd /opt \
&& git clone https://github.com/choosehappy/HistoQC.git \
&& pip3 install -r /opt/HistoQC/requirements.txt

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