fix links to old ccb-hms repo

carpentries-incubator · Nov 22, 2024 · b7bd303 · b7bd303
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diff --git a/episodes/hca.Rmd b/episodes/hca.Rmd
@@ -60,7 +60,7 @@ bulk counts are also available to facilitate large-scale, summary analyses of
 transcriptional profiles. 
 
 ```{r, echo = FALSE}
-knitr::include_graphics("https://raw.githubusercontent.com/ccb-hms/osca-workbench/main/episodes/figures/curatedAtlasQuery.png")
+knitr::include_graphics("https://raw.githubusercontent.com/carpentries-incubator/bioc-scrnaseq/main/episodes/figures/curatedAtlasQuery.png")
 ```
 
 ## Data Sources in R / Bioconductor

diff --git a/episodes/intro-sce.Rmd b/episodes/intro-sce.Rmd
@@ -177,7 +177,7 @@ counts(sce)[1:3, 1:3]
 You will notice that in this case we have a sparse matrix of class `dgTMatrix`
 inside the object. More generally, any "matrix-like" object can be used, e.g.,
 dense matrices or HDF5-backed matrices (as we will explore later in the
-[Working with large data](https://ccb-hms.github.io/osca-workbench/large_data.html)
+[Working with large data](https://carpentries-incubator.github.io/bioc-scrnaseq/large_data.html)
 episode).
 
 ### `colData` and `rowData`