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return gene context info for genomic queries
enhancement
New feature or request
priority:medium
Medium priority
#551
opened Mar 27, 2024 by
katiestahl
pytest-asyncio DeprecationWarning for event_loop
priority:low
Low priority
test
Changes to test code only
#534
opened Feb 8, 2024 by
korikuzma
Reduce the number of tests
priority:low
Low priority
test
Changes to test code only
#527
opened Jan 10, 2024 by
korikuzma
Use biocommons.hgvs for parsing HGVS expressions
build
Changes that affect the build system or dependencies
priority:medium
Medium priority
technical debt
A feature/requirement implemented in a sub-optimal way & must be re-written. Contrast to "cleanup"
#526
opened Dec 11, 2023 by
korikuzma
Consider lazy loading for class attributes
priority:low
Low priority
technical debt
A feature/requirement implemented in a sub-optimal way & must be re-written. Contrast to "cleanup"
#522
opened Nov 7, 2023 by
korikuzma
Expose cool-seq-tool get_grch38_mane_gene_cds_overlap endpoint
enhancement
New feature or request
priority:high
High priority
#521
opened Nov 7, 2023 by
korikuzma
2 tasks
Add basic API endpoint tests
priority:medium
Medium priority
test
Changes to test code only
#519
opened Oct 26, 2023 by
korikuzma
If genomic query fails getting liftover/mane, try using original input to return a response
enhancement
New feature or request
priority:medium
Medium priority
#506
opened Sep 1, 2023 by
korikuzma
Stabilize construction of required resources
priority:low
Low priority
technical debt
A feature/requirement implemented in a sub-optimal way & must be re-written. Contrast to "cleanup"
#499
opened Aug 22, 2023 by
jsstevenson
Add support for SPDI nomenclature in /to_vrs and /normalize
enhancement
New feature or request
#497
opened Aug 22, 2023 by
korikuzma
Fix GH Action installing deps
ci/cd
Continuous integration and continuous delivery/deployment changes
priority:low
Low priority
#495
opened Aug 21, 2023 by
korikuzma
Considering adding vulture pre-commit hook
build
Changes that affect the build system or dependencies
priority:low
Low priority
#493
opened Aug 21, 2023 by
korikuzma
Adding input assembly for gnomad vcf queries
bug
Something isn't working
vrs-2-alpha
Changes are needed for the `staging` branch which points to VRS 2.0-alpha
#490
opened Aug 10, 2023 by
korikuzma
Parameterize New feature or request
vrs_ref_allele_seq
enhancement
#481
opened Aug 8, 2023 by
korikuzma
Improve free text query performance
performance
Changes that are for performance improvements only.
priority:high
High priority
#477
opened Jul 31, 2023 by
korikuzma
No gene symbol found for Something isn't working
priority:low
Low priority
ENST00000277541.6
bug
#473
opened Jul 24, 2023 by
korikuzma
Add more tests for HGVS Ensembl expressions
priority:low
Low priority
test
Changes to test code only
#471
opened Jul 20, 2023 by
korikuzma
Better error and warning handling
priority:medium
Medium priority
technical debt
A feature/requirement implemented in a sub-optimal way & must be re-written. Contrast to "cleanup"
#467
opened Jul 18, 2023 by
korikuzma
Add FAQ Docs
documentation
Improvements or additions to documentation
#466
opened Jul 14, 2023 by
korikuzma
Parsed to CNV endpoints do not cover all ambiguous ranges
bug
Something isn't working
priority:low
Low priority
#465
opened Jul 13, 2023 by
korikuzma
Add support for NG expressions
enhancement
New feature or request
priority:low
Low priority
#464
opened Jul 13, 2023 by
korikuzma
Support NCBI36 / hg18
enhancement
New feature or request
priority:medium
Medium priority
#463
opened Jul 12, 2023 by
korikuzma
parsed to copy number endpoints should allow curie or gene as subject
enhancement
New feature or request
priority:low
Low priority
#451
opened Jun 21, 2023 by
korikuzma
to_vrs returns valid results when hgvs position is greater than ref sequence length
bug
Something isn't working
#449
opened Jun 19, 2023 by
larrybabb
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