use lower case for system

cancervariants · Sep 12, 2023 · 9f9e7b0 · 9f9e7b0
1 parent 6c7cc58
commit 9f9e7b0
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/disease/query.py b/disease/query.py
@@ -308,7 +308,7 @@ def _add_merged_meta(self, response: Dict) -> Dict:
 
         for src in sources:
             try:
-                src_name = PREFIX_LOOKUP[src.lower()]
+                src_name = PREFIX_LOOKUP[src]
             except KeyError:
                 # not an imported source
                 continue
@@ -339,7 +339,7 @@ def _add_disease(
             mappings.append(
                 core_models.Mapping(
                     coding=core_models.Coding(
-                        code=core_models.Code(code), system=system
+                        code=core_models.Code(code), system=system.lower()
                     ),
                     relation=core_models.Relation.RELATED_MATCH,
                 )

diff --git a/tests/unit/test_query.py b/tests/unit/test_query.py
@@ -32,7 +32,7 @@ def neuroblastoma():
                     "relation": "relatedMatch",
                 },
                 {
-                    "coding": {"code": "769", "system": "DOID"},
+                    "coding": {"code": "769", "system": "doid"},
                     "relation": "relatedMatch",
                 },
                 {