Configure timeline changes for cdsi data release (#5060)

* Disable datadog tracking * add line chart track for mskcc measurements track
cBioPortal · Dec 5, 2024 · 00337ba · 00337ba
1 parent 209c834
commit 00337ba
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Showing 2 changed files with 36 additions and 14 deletions.
diff --git a/src/appBootstrapper.tsx b/src/appBootstrapper.tsx
@@ -370,14 +370,14 @@ $(document).ready(async () => {
 
     initializeAppStore(stores.appStore);
 
-    if (
-        ['genie-public-portal', 'public-portal'].includes(
-            stores.appStore.serverConfig.app_name!
-        ) &&
-        !isWebdriver()
-    ) {
-        enableDataDogTracking(stores.appStore);
-    }
+    // if (
+    //     ['genie-public-portal', 'public-portal'].includes(
+    //         stores.appStore.serverConfig.app_name!
+    //     ) &&
+    //     !isWebdriver()
+    // ) {
+    //     enableDataDogTracking(stores.appStore);
+    // }
 
     await loadCustomJs();
 

diff --git a/src/pages/patientView/timeline/timeline_helpers.tsx b/src/pages/patientView/timeline/timeline_helpers.tsx
@@ -1,14 +1,12 @@
 import {
     formatDate,
     getAttributeValue,
-    renderStack,
-    renderSuperscript,
-    TIMELINE_TRACK_HEIGHT,
+    ITimelineConfig,
+    POINT_COLOR,
     TimelineEvent,
+    TimelineLegendItem,
     TimelineTrackSpecification,
     TimelineTrackType,
-    ITimelineConfig,
-    POINT_COLOR,
 } from 'cbioportal-clinical-timeline';
 import {
     getEventColor,
@@ -24,7 +22,6 @@ import { ISampleMetaDeta } from 'pages/patientView/timeline/TimelineWrapper';
 import { ClinicalEvent } from 'cbioportal-ts-api-client';
 import { getColor } from 'cbioportal-frontend-commons';
 import ReactMarkdown from 'react-markdown';
-import { TimelineLegendItem } from 'cbioportal-clinical-timeline';
 
 const OTHER = 'Other';
 
@@ -110,6 +107,31 @@ export function configureTimelineToxicityColors(baseConfig: ITimelineConfig) {
         'TOX_OTHER_SPECIFY',
     ]);
 
+    baseConfig.trackStructures!.push(['MEASUREMENTS', 'TEST']);
+
+    baseConfig.trackEventRenderers?.push({
+        trackTypeMatch: /BMI/i,
+        configureTrack: (cat: TimelineTrackSpecification) => {
+            //     psaTrack.trackType = TimelineTrackType.LINE_CHART;
+            //     psaTrack.getLineChartValue = (e: TimelineEvent) => {}
+            cat.trackType = TimelineTrackType.LINE_CHART;
+            cat.getLineChartValue = (e: TimelineEvent) => {
+                try {
+                    const val = e?.event?.attributes?.find(
+                        e => e.key === 'RESULT'
+                    )?.value;
+                    if (val !== undefined) {
+                        return parseFloat(val);
+                    } else {
+                        return null;
+                    }
+                } catch (ex) {
+                    return null;
+                }
+            };
+        },
+    });
+
     baseConfig.eventColorGetter = function(e: TimelineEvent) {
         const grade = e.event.attributes.find(
             (att: any) => att.key === 'GRADE'