Update project documentation

.github/workflows/publish-docs.yml

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+name: Publish mkdocs documentation
+
+on:
+  workflow_dispatch:
+  push:
+    branches:
+      - main
+    paths:
+      - 'docs/**'
+
+permissions:
+  contents: write
+
+jobs:
+  build-and-publish:
+    name: Publish mkdocs documentation
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout main
+        uses: actions/checkout@v3
+
+      - name: Configure Git Credentials
+        run: |
+          git config user.name github-actions[bot]
+          git config user.email 41898282+github-actions[bot]@users.noreply.github.com
+
+      - name: Set up Python
+        uses: actions/setup-python@v4
+        with:
+            python-version: 3.x
+
+      - run: pip install mkdocs-material mkdocs-include-dir-to-nav mkdocs-nav-weight==0.2.0
+
+      - run: mkdocs gh-deploy --force

docs/cell_sets/Class_139f0ee50b.md

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+---
+title: Class:139f0ee50b
+weight: 10
+---
+## non-neuronal (Class:139f0ee50b)
+<b>Hierarchy: </b>
+[Class:139f0ee50b](../Class_139f0ee50b)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/Class_139f0ee50b](https://purl.brain-bican.org/taxonomy/AIT_MTG/Class_139f0ee50b)
+
+---
+
+
+**Labelset:** Class (Rank: 2)
+
+**Parent Cell Set:** -
+
+non-neuronal
+
+
+**Cell Ontology Term:**  astrocyte of the cerebral cortex ([CL:0002605](https://www.ebi.ac.uk/ols/ontologies/cl/terms?obo_id=CL:0002605)) 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/Class_a85f01df63.md

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+---
+title: Class:a85f01df63
+weight: 10
+---
+## excitatory (Class:a85f01df63)
+<b>Hierarchy: </b>
+[Class:a85f01df63](../Class_a85f01df63)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/Class_a85f01df63](https://purl.brain-bican.org/taxonomy/AIT_MTG/Class_a85f01df63)
+
+---
+
+
+**Labelset:** Class (Rank: 2)
+
+**Parent Cell Set:** -
+
+excitatory
+
+
+**Cell Ontology Term:**  L5 extratelencephalic projecting glutamatergic cortical neuron ([CL:4023041](https://www.ebi.ac.uk/ols/ontologies/cl/terms?obo_id=CL:4023041)) 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/Class_d4ef18755c.md

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+---
+title: Class:d4ef18755c
+weight: 10
+---
+## inhibitory (Class:d4ef18755c)
+<b>Hierarchy: </b>
+[Class:d4ef18755c](../Class_d4ef18755c)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/Class_d4ef18755c](https://purl.brain-bican.org/taxonomy/AIT_MTG/Class_d4ef18755c)
+
+---
+
+
+**Labelset:** Class (Rank: 2)
+
+**Parent Cell Set:** -
+
+inhibitory
+
+
+**Cell Ontology Term:**  lamp5 GABAergic cortical interneuron ([CL:4023011](https://www.ebi.ac.uk/ols/ontologies/cl/terms?obo_id=CL:4023011)) 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/CrossArea_cluster_00d68f69b0.md

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+---
+title: CrossArea_cluster:00d68f69b0
+weight: 8
+---
+## Vip_11 (CrossArea_cluster:00d68f69b0)
+<b>Hierarchy: </b>
+[Class:d4ef18755c](../Class_d4ef18755c) >
+[CrossArea_subclass:082c817b6f](../CrossArea_subclass_082c817b6f) >
+[CrossArea_cluster:00d68f69b0](../CrossArea_cluster_00d68f69b0)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_00d68f69b0](https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_00d68f69b0)
+
+---
+
+
+**Labelset:** CrossArea_cluster (Rank: 0)
+
+**Parent Cell Set:** Vip ([CrossArea_subclass:082c817b6f](../CrossArea_subclass_082c817b6f))
+
+Vip_11
+
+
+**Cell Ontology Term:** 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/CrossArea_cluster_020e16d80d.md

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+---
+title: CrossArea_cluster:020e16d80d
+weight: 8
+---
+## Sncg_6 (CrossArea_cluster:020e16d80d)
+<b>Hierarchy: </b>
+[Class:d4ef18755c](../Class_d4ef18755c) >
+[CrossArea_subclass:069c284831](../CrossArea_subclass_069c284831) >
+[CrossArea_cluster:020e16d80d](../CrossArea_cluster_020e16d80d)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_020e16d80d](https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_020e16d80d)
+
+---
+
+
+**Labelset:** CrossArea_cluster (Rank: 0)
+
+**Parent Cell Set:** Sncg ([CrossArea_subclass:069c284831](../CrossArea_subclass_069c284831))
+
+Sncg_6
+
+
+**Cell Ontology Term:** 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/CrossArea_cluster_032e18f9fd.md

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+---
+title: CrossArea_cluster:032e18f9fd
+weight: 8
+---
+## Pvalb_9 (CrossArea_cluster:032e18f9fd)
+<b>Hierarchy: </b>
+[Class:d4ef18755c](../Class_d4ef18755c) >
+[CrossArea_subclass:5bcef2988c](../CrossArea_subclass_5bcef2988c) >
+[CrossArea_cluster:032e18f9fd](../CrossArea_cluster_032e18f9fd)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_032e18f9fd](https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_032e18f9fd)
+
+---
+
+
+**Labelset:** CrossArea_cluster (Rank: 0)
+
+**Parent Cell Set:** Pvalb ([CrossArea_subclass:5bcef2988c](../CrossArea_subclass_5bcef2988c))
+
+Pvalb_9
+
+
+**Cell Ontology Term:** 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/CrossArea_cluster_036b11ab2d.md

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+---
+title: CrossArea_cluster:036b11ab2d
+weight: 8
+---
+## Sst_28 (CrossArea_cluster:036b11ab2d)
+<b>Hierarchy: </b>
+[Class:d4ef18755c](../Class_d4ef18755c) >
+[CrossArea_subclass:8fa477a378](../CrossArea_subclass_8fa477a378) >
+[CrossArea_cluster:036b11ab2d](../CrossArea_cluster_036b11ab2d)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_036b11ab2d](https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_036b11ab2d)
+
+---
+
+
+**Labelset:** CrossArea_cluster (Rank: 0)
+
+**Parent Cell Set:** Sst ([CrossArea_subclass:8fa477a378](../CrossArea_subclass_8fa477a378))
+
+Sst_28
+
+
+**Cell Ontology Term:** 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/CrossArea_cluster_048c1cc9cc.md

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+---
+title: CrossArea_cluster:048c1cc9cc
+weight: 8
+---
+## L4 IT_5 (CrossArea_cluster:048c1cc9cc)
+<b>Hierarchy: </b>
+[Class:a85f01df63](../Class_a85f01df63) >
+[CrossArea_subclass:0533b137f6](../CrossArea_subclass_0533b137f6) >
+[CrossArea_cluster:048c1cc9cc](../CrossArea_cluster_048c1cc9cc)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_048c1cc9cc](https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_048c1cc9cc)
+
+---
+
+
+**Labelset:** CrossArea_cluster (Rank: 0)
+
+**Parent Cell Set:** L4 IT ([CrossArea_subclass:0533b137f6](../CrossArea_subclass_0533b137f6))
+
+L4 IT_5
+
+
+**Cell Ontology Term:** 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/CrossArea_cluster_09c28f8311.md

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+---
+title: CrossArea_cluster:09c28f8311
+weight: 8
+---
+## Vip_18 (CrossArea_cluster:09c28f8311)
+<b>Hierarchy: </b>
+[Class:d4ef18755c](../Class_d4ef18755c) >
+[CrossArea_subclass:082c817b6f](../CrossArea_subclass_082c817b6f) >
+[CrossArea_cluster:09c28f8311](../CrossArea_cluster_09c28f8311)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_09c28f8311](https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_09c28f8311)
+
+---
+
+
+**Labelset:** CrossArea_cluster (Rank: 0)
+
+**Parent Cell Set:** Vip ([CrossArea_subclass:082c817b6f](../CrossArea_subclass_082c817b6f))
+
+Vip_18
+
+
+**Cell Ontology Term:** 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+

docs/cell_sets/CrossArea_cluster_0bb0eed4f8.md

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+---
+title: CrossArea_cluster:0bb0eed4f8
+weight: 8
+---
+## L6b_4 (CrossArea_cluster:0bb0eed4f8)
+<b>Hierarchy: </b>
+[Class:a85f01df63](../Class_a85f01df63) >
+[CrossArea_subclass:7b6e7cc097](../CrossArea_subclass_7b6e7cc097) >
+[CrossArea_cluster:0bb0eed4f8](../CrossArea_cluster_0bb0eed4f8)
+
+**PURL:** [https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_0bb0eed4f8](https://purl.brain-bican.org/taxonomy/AIT_MTG/CrossArea_cluster_0bb0eed4f8)
+
+---
+
+
+**Labelset:** CrossArea_cluster (Rank: 0)
+
+**Parent Cell Set:** L6b ([CrossArea_subclass:7b6e7cc097](../CrossArea_subclass_7b6e7cc097))
+
+L6b_4
+
+
+**Cell Ontology Term:** 
+
+[MARKER GENES.]: #
+
+
+---
+
+[TRANSFERRED ANNOTATIONS.]: #
+
+
+[AUTHOR ANNOTATION FIELDS.]: #
+