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bugfix in workflow #130

bugfix in workflow

bugfix in workflow #130

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
#
# NOTE: This workflow is overkill for most R packages and
# check-standard.yaml is likely a better choice.
# usethis::use_github_action("check-standard") will install it.
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
# Allow manually triggering the workflow via GitHub website, gh CLI tool etc.
# Also adds parameter to enable tmate (inetractive tmux session for debugging)
workflow_dispatch:
inputs:
debug_enabled:
type: boolean
description: 'Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)'
required: false
default: false
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (R-${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: 'macOS-latest' , r: 'release'}
- {os: 'windows-latest', r: 'release'}
- {os: 'ubuntu-latest', r: 'devel', http-user-agent: 'release'}
- {os: 'ubuntu-latest', r: 'release'}
- {os: 'ubuntu-latest', r: 'oldrel-1'}
- {os: 'ubuntu-latest', r: 'oldrel-2'}
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
TORCH_TEST: 1
TORCH_INSTALL: 1
TORCH_COMMIT_SHA: "none"
OMP_NUM_THREADS: 1
MKL_NUM_THREADS: 1
PYTORCH_ENABLE_MPS_FALLBACK: 1
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
id: setup-r
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check
- name: Install Miniconda
run: reticulate::install_miniconda()
shell: Rscript {0}
- name: Install Tensorflow + Keras deps
run: keras::install_keras()
shell: Rscript {0}
# Get a tmux ssh session for interactive debugging
# Controlled via inputs from GitHub webinterface
# See https://github.com/mxschmitt/action-tmate
- name: Setup tmate session
uses: mxschmitt/action-tmate@v3
if: ${{ github.event_name == 'workflow_dispatch' && inputs.debug_enabled }}
# See https://github.com/mlverse/torch/issues/1213#issuecomment-2495533992
- name: Build libtorch without openMP (only for macOS)
if: ${{ runner.os == 'macOS' }}
run: |
options(timeout = 600)
kind <- "cpu-intel"
version <- "0.13.0.9001"
options(repos = c(
torch = sprintf("https://torch-cdn.mlverse.org/packages/%s/%s/", kind, version),
CRAN = "https://cloud.r-project.org" # or any other from which you want to install the other R dependencies.
))
install.packages("torch", type = "binary")
shell: Rscript {0}
- name: Check if torch is installed
run: |
library(torch)
if (!torch_is_installed()) {
print("Torch is not installed!")
install_torch()
}
if (torch::backends_mps_is_available()) {
print("LibTorch is built with MPS support!")
}
print(paste0("Default number of threads: ", torch_get_num_threads()))
print(torch_randn(1))
shell: Rscript {0}
- uses: r-lib/actions/check-r-package@v2
with:
error-on: '"error"'
args: 'c("--no-multiarch", "--no-manual", "--as-cran")'
upload-snapshots: true