Merge pull request #14 from bips-hb/JSS_publication #122
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| # | |
| # NOTE: This workflow is overkill for most R packages and | |
| # check-standard.yaml is likely a better choice. | |
| # usethis::use_github_action("check-standard") will install it. | |
| on: | |
| push: | |
| branches: [main, master] | |
| pull_request: | |
| branches: [main, master] | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (R-${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: 'macOS-latest' , r: 'release'} | |
| - {os: 'windows-latest', r: 'release'} | |
| - {os: 'ubuntu-latest', r: 'devel', http-user-agent: 'release'} | |
| - {os: 'ubuntu-latest', r: 'release'} | |
| - {os: 'ubuntu-latest', r: 'oldrel-1'} | |
| - {os: 'ubuntu-latest', r: 'oldrel-2'} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| TORCH_TEST: 1 | |
| TORCH_INSTALL: 1 | |
| TORCH_COMMIT_SHA: "none" | |
| PYTORCH_ENABLE_MPS_FALLBACK: 1 | |
| PYTORCH_MPS_HIGH_WATERMARK_RATIO: 0.0 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| id: setup-r | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - name: Install Miniconda | |
| run: reticulate::install_miniconda() | |
| shell: Rscript {0} | |
| - name: Install Tensorflow + Keras deps | |
| run: keras::install_keras(tensorflow = 'default-cpu') | |
| shell: Rscript {0} | |
| - name: Check if torch is installed | |
| run: | | |
| library(torch) | |
| if (!torch_is_installed()) { | |
| print("Torch is not installed!") | |
| install_torch() | |
| } | |
| print(torch_randn(1)) | |
| shell: Rscript {0} | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| error-on: '"error"' | |
| args: 'c("--no-multiarch", "--no-manual", "--as-cran")' | |
| upload-snapshots: true |