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Use centralized biolink/schema version tags #690

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merged 1 commit into from
Aug 11, 2023
Merged

Use centralized biolink/schema version tags #690

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5 changes: 3 additions & 2 deletions src/controllers/async/asyncquery.js
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Original file line number Diff line number Diff line change
Expand Up @@ -168,7 +168,8 @@ exports.asyncqueryResponse = async (handler, callback_url, jobID = null, jobURL
results: [],
},
status: "Failed",
schema_version: '1.4.0',
schema_version: global.SCHEMA_VERSION,
biolink_version: global.BIOLINK_VERSION,
workflow: [{ id: 'lookup' }],
description: e.toString(),
trace: process.env.NODE_ENV === "production" ? undefined : e.stack,
Expand All @@ -177,7 +178,7 @@ exports.asyncqueryResponse = async (handler, callback_url, jobID = null, jobURL
if (jobID) {
await storeQueryResponse(jobID, response);
}

throw e;
}

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5 changes: 3 additions & 2 deletions src/controllers/async/asyncquery_queue.js
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Expand Up @@ -63,7 +63,8 @@ exports.getQueryQueue = name => {
await axios({
method: "post",
url: job.data.callback_url,
schema_version: '1.4.0',
schema_version: global.SCHEMA_VERSION,
biolink_version: global.BIOLINK_VERSION,
workflow: [{ id: 'lookup' }],
logs: logs,
data: {
Expand All @@ -84,4 +85,4 @@ exports.getQueryQueue = name => {
});

return global.queryQueue[name];
};
};
4 changes: 3 additions & 1 deletion src/controllers/threading/taskHandler.js
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Expand Up @@ -34,6 +34,8 @@ Sentry.init({
const runTask = async ({ req, route, port, job: { jobId, queueName } = {} }) => {
debug(`Worker thread ${threadId} beginning task.`);

global.SCHEMA_VERSION = "1.4.0"

global.parentPort = port;
port.postMessage({ threadId, registerId: true });
global.cachingTasks = [];
Expand All @@ -49,7 +51,7 @@ const runTask = async ({ req, route, port, job: { jobId, queueName } = {} }) =>

const transaction = Sentry.startTransaction({ name: route });
transaction.setData("request", req.data.queryGraph);
Sentry.getCurrentHub().configureScope((scope) => {
Sentry.getCurrentHub().configureScope((scope) => {
scope.clearBreadcrumbs();
scope.setSpan(transaction);
});
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