Merge pull request #1003 from biorack/untargeted_dev

Untargeted dev
biorack · Dec 10, 2024 · 44a668d · 44a668d
2 parents 1524159 + 5809597
commit 44a668d
Showing 1 changed file with 2 additions and 3 deletions.
diff --git a/metatlas/untargeted/tools.py b/metatlas/untargeted/tools.py
@@ -2217,9 +2217,8 @@ def update_new_untargeted_tasks(
                         with open(params_filename,'w') as fid:
                             fid.write('%s'%custom_params)                        
                     else:
-                        logging.info(tab_print("%s MZmine parameter file (CUSTOM *_batch-params.xml)"%(polarity), 3))
-                        custom_params_list = custom_mzmine_batch_params.split(',')
-                        for custom_param in custom_params_list:
+                        logging.info(tab_print("%s MZmine parameter file (see custom input above)"%(polarity), 3))
+                        for custom_param in custom_mzmine_batch_params:
                             if polarity_short.upper()+"-" in custom_param:
                                 mzmine_running_parameters = custom_param
                                 break