Merge pull request #3 from bionode/travis_yml

Added a .travis.yml file.
bionode · Oct 4, 2017 · 598917d · 598917d
2 parents e61cbd3 + 1244fff
commit 598917d
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Showing 3 changed files with 7 additions and 5 deletions.
diff --git a/.travis.yml b/.travis.yml
@@ -0,0 +1,3 @@
+language: node_js
+node_js:
+  - "7"
diff --git a/addTaxonToBlast/addTaxonToBlast.js b/addTaxonToBlast/addTaxonToBlast.js
@@ -18,14 +18,13 @@ var taxonToAdd = process.argv[3]
 // NCBI query function
 var queryStream = through.obj(query)
 
-function query(line, encoding, next) {
-  uid = line.split('\t')[16]
+function query (line, encoding, next) {
+  var uid = line.split('\t')[16]
   ncbi.fetch('taxonomy', uid + '[uid]', (taxonomy) => {
     try {
       var taxons = taxonomy[0].TaxaSet.Taxon[0].LineageEx[0].Taxon
       var taxClass = taxons.filter(t => t.Rank[0] === taxonToAdd)[0].ScientificName[0]
-    }
-    catch (error) {
+    } catch (error) {
       var taxClass = 'NA'
     }
     this.push(line + '\t' + taxClass.toString() + '\n')

diff --git a/addTaxonToBlast/package.json b/addTaxonToBlast/package.json
@@ -4,7 +4,7 @@
   "description": "Add taxonomic information to a tab separated BLAST output file",
   "main": "addTaxonToBlast.js",
   "scripts": {
-    "test": "echo \"Error: no test specified\" && exit 1"
+    "test": "standard && dependency-check . && mocha"
   },
   "author": "Bruno Vieira",
   "license": "MIT",