chore: Cut out deadcode

bioinformaticsorphanage · Dec 7, 2023 · ddab000 · ddab000
1 parent b8f8016
commit ddab000
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Showing 4 changed files with 0 additions and 15 deletions.
diff --git a/src/include/align/Aligner.hpp b/src/include/align/Aligner.hpp
@@ -141,8 +141,6 @@ class Aligner {
   const map::Mapper         mapper_;
   const SimilarityScores    similarity_;
   const ScoreType           gapInit_;
-  // const ScoreType           gapExtend_;
-  // const ScoreType           unclipScore_;
   const ScoreType           alnMinScore_;
   const int                 aln_cfg_mapq_min_len_;
   const int                 aln_cfg_unpaired_pen_;

diff --git a/src/include/map/ChainBuilder.hpp b/src/include/map/ChainBuilder.hpp
@@ -77,7 +77,6 @@ class ChainBuilder {
   size_t                 seedChainCount_;
   double                 chainFilterRatio_    = 2.0;
   double                 chainFilterConstant_ = 0.0;
-  // int                    numRandomSampleHits_ = 0;
 };
 
 }  // namespace map

diff --git a/src/lib/align/Aligner.cpp b/src/lib/align/Aligner.cpp
@@ -56,8 +56,6 @@ Aligner::Aligner(
     mapper_(&hashtable),
     similarity_(similarity),
     gapInit_(gapInit),
-    // gapExtend_(gapExtend),
-    // unclipScore_(unclipScore),
     alnMinScore_(alnMinScore),
     aln_cfg_mapq_min_len_(aln_cfg_mapq_min_len),
     aln_cfg_unpaired_pen_(aln_cfg_unpaired_pen),

diff --git a/stubs/dragen/src/host/infra/linux/infra_linux_utils.cpp b/stubs/dragen/src/host/infra/linux/infra_linux_utils.cpp
@@ -39,16 +39,6 @@ namespace infra {
 static std::string g_kernelVersionStr;
 static int         g_kernelVersion;
 
-// static constexpr int MKVER(const int major, const int minor, const int patch)
-// {
-//   return major * 10000 + minor * 100 + patch;
-// }
-
-// static constexpr int MKVER(const int major, const int minor)
-// {
-//   return major * 10000 + minor * 100;
-// }
-
 //------------------------------------------------------------------------alain
 int GetDmiValue(const std::string& label, std::string& value)
 {