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| --- | ||
| seminars: | ||
| - date: "2023-06-29" | ||
| flyer: 062923_seminar.png | ||
| # recording: | ||
| - date: "2024-08-15" | ||
| talks: | ||
| - speaker: Tal Einav, PhD | ||
| speaker_title: Assistant Professor of Computational Immunology, La Jolla Institute for Immunology (LJI) | ||
| talk_title: "\"Blending Biophysics and Machine Learning to Predict the Antibody Response\"" | ||
| keywords: Antibody-Virus Interactions, Biophysics, Machine Learning | ||
| website: https://taleinav.github.io/ | ||
| photo: tal_einav.jpg | ||
| - speaker: Pallav Kosuri, PhD | ||
| speaker_title: Assistant Professor, Salk Institute (BioSci @UCSD) | ||
| talk_title: "\"Spatial single-cell transcription and mechanics\"" | ||
| keywords: Spatial Transcriptomics, Single-Cell Biology, Super-Resolution Microscopy, Cardiac Biology, Molecular Biophysics, Single-Molecule Mechanics, DNA Origami | ||
| website: https://kosurilab.com | ||
| photo: pallav_kosuri.jpg | ||
| - date: "2023-07-06" | ||
| flyer: 070623_seminar.png | ||
| # recording: | ||
| - speaker: TBD | ||
| - date: "2024-08-22" | ||
| talks: | ||
| - speaker: Abraham Palmer, PhD | ||
| speaker_title: Professor, Psychiatry | ||
| talk_title: "\"Behavioral Genetics\"" | ||
| photo: abraham_palmer.jpg | ||
| keywords: Genetics, Behavior, GWAS, Humans, Rats | ||
| website: https://palmerlab.org/ | ||
| - speaker: Nathan Lewis, PhD | ||
| speaker_title: Associate Professor of Pediatrics and Bioengineering | ||
| talk_title: "\"Infiltrating the social network of cells: Using systems biology to unravel drivers of cell-cell communication\"" | ||
| photo: nathan_lewis.jpg | ||
| keywords: Systems biology, Cell engineering, Biotechnology | ||
| website: https://lewislab.ucsd.edu/ | ||
| - date: "2023-07-13" | ||
| # flyer: | ||
| # recording: | ||
| - speaker: TBD | ||
| - date: "2024-08-29" | ||
| talks: | ||
| - speaker: Jonathan Sebat, PhD | ||
| speaker_title: Professor, Department of Cellular & Molecular Medicine, Department of Psychiatry | ||
| talk_title: "\"Whole genome dissection of the autism spectrum at the level of pathways, cell types and brain circuitry\"" | ||
| photo: jonathan_sebat.jpg | ||
| keywords: Genome sequencing, Complex Trait Genetics, Genetic Therapies | ||
| website: https://sebatlab.org/ | ||
| - speaker: Vineet Bafna, PhD | ||
| speaker_title: Professor, Department of Computer Science | ||
| talk_title: "\"Extrachromosomal DNA in cancer\"" | ||
| photo: vineet_bafna.jpg | ||
| website: http://proteomics.ucsd.edu/vbafna/ | ||
| - date: "2023-07-20" | ||
| flyer: 072023_seminar.png | ||
| # recording: | ||
| talks: | ||
| - speaker: Matteo D'Antonio, PhD | ||
| speaker_title: Assistant Professor, Medicine - Division of Biomedical Informatics | ||
| talk_title: "\"Improving inclusion in genetics: Developing new methods to include diverse and admixed populations in genetic association studies\"" | ||
| photo: matteo_dantonio.jpg | ||
| keywords: Genome-Wide Association Studies, Polygenic Risk Scores, Admixture | ||
| website: https://admixgenomics.ucsd.edu/cast-team/ | ||
| - speaker: Vikas Bansal | ||
| speaker_title: Associate Professor, School of Medicine, Computer Science | ||
| talk_title: "\"Variant calling in low-copy repeats and human disease\"" | ||
| photo: vikas_bansal.jpg | ||
| keywords: low-copy repeats, variant calling, copy number, DNA sequencing technologies, duplicated genes | ||
| website: https://bansal-lab.github.io/ | ||
| - date: "2023-07-27" | ||
| flyer: 072723_seminar.png | ||
| # recording: | ||
| talks: | ||
| - speaker: Lukas Chavez, PhD | ||
| speaker_title: Associate Professor, Departments of Pediatrics and Bioengineering | ||
| talk_title: "\"Circular Extrachromosomal DNA as a New Target in Childhood Cancers\"" | ||
| photo: lukas_chavez.jpg | ||
| keywords: Genomics, Epigenomics, Cancer, Structural Variants, Computational Biology, Translational/Clinical Bioinformatics | ||
| website: https://chavezlab.org/ | ||
| - speaker: Anjana Rao, PhD | ||
| speaker_title: Head of the Division of Signaling and Gene Expression, La Jolla Institute for Immunology | ||
| talk_title: "\"TET Methylcytosine Dioxygenases, Inflammation, and Cancer\"" | ||
| photo: anjana_rao.jpeg | ||
| keywords: TET enzymes, DNA methylation, Immunology, Cancer | ||
| website: https://www.lji.org/labs/rao/ | ||
| - date: "2023-08-03" | ||
| # flyer: | ||
| # recording: | ||
| talks: | ||
| - speaker: Ravi Goyal, PhD | ||
| speaker_title: Assistant Professor, Medicine | ||
| talk_title: "\"Predicting HIV incidence: Integrating molecular sequence and epidemiological data\"" | ||
| photo: ravi_goyal.jpg | ||
| keywords: Mathematical models, molecular sequence, network science, HIV | ||
| website: https://profiles.ucsd.edu/ravi.goyal | ||
| - speaker: Amit Majithia, PhD | ||
| speaker_title: Associate Professor, Department of Medicine | ||
| talk_title: "\"Distilling new drug targets using biobanks and functional genomics\"" | ||
| photo: amit_majithia.jpg | ||
| keywords: metabolic disease, human genetics, deep mutational scan, genome engineering | ||
| website: https://medschool.ucsd.edu/som/medicine/divisions/endocrinology/research/labs/majithia/Pages/default.aspx | ||
| - date: "2023-08-10" | ||
| # flyer: | ||
| # recording: | ||
| talks: | ||
| - speaker: Gurol Suel, PhD | ||
| speaker_title: Professor, Department of Molecular Biology | ||
| talk_title: "\"Modeling How Dormant Cells Come Back To Life\"" | ||
| photo: gurol_suel.jpg | ||
| keywords: single-cell dynamics | ||
| website: https://suellab.github.io/ | ||
| - date: "2023-08-17" | ||
| # flyer: | ||
| # recording: | ||
| talks: | ||
| - speaker: Rob Knight, PhD | ||
| speaker_title: Professor, Pediatrics | ||
| talk_title: "\"Rob will be discussing his lab’s work, share rotation opportunities, and take Q&A\"" | ||
| photo: rob_knight.jpg | ||
| keywords: Microbiome, Qiita, Wastewater | ||
| website: https://knightlab.ucsd.edu/wordpress/ | ||
| - speaker: Christine Cheng, PhD | ||
| speaker_title: Professor, Department of Psychiatry | ||
| talk_title: "\"Single cell transcriptomics and epigenomics for opioid use disorder and Alzhiemer's disease\"" | ||
| photo: christine_cheng.png | ||
| keywords: Single-cell transcriptomics, Epigenomics, Neurodegeneration | ||
| website: https://www.chenglaboratory.com/ | ||
| - date: "2022-08-24" | ||
| # flyer: | ||
| # recording: | ||
| talks: | ||
| - speaker: Kit Curtius, PhD | ||
| speaker_title: Assistant Professor, UCSD Division of Biomedical Informatics, Department of Medicine | ||
| talk_title: "\"Quantitative modeling of cancer evolution and early detection\"" | ||
| photo: kit_curtius.jpg | ||
| keywords: Mathematical Modeling, Pre-Cancer Evolution, Translational Bioinformatics | ||
| website: https://qcclab.com | ||
| - speaker: Ron Evans, PhD | ||
| speaker_title: Professor, The Salk Institute for Biological Studies, Gene Expression Lab | ||
| talk_title: "\"TBD\"" | ||
| photo: ron_evans.jpg | ||
| keywords: nuclear receptors, epigenomics, gene expression | ||
| website: https://evans.salk.edu/ | ||
| - date: "2022-08-31" | ||
| # flyer: | ||
| # recording: | ||
| talks: | ||
| - speaker: Tsung-Ting Kuo, PhD | ||
| speaker_title: Assistant Professor, Medicine | ||
| talk_title: "\"Biomedical Privacy-Preserving Modeling on Blockchain\"" | ||
| photo: tsung-ting_kuo.jpg | ||
| keywords: Machine Learning, Blockchain Technology, Privacy Protection | ||
| website: https://profiles.ucsd.edu/tsung-ting.kuo | ||
| - speaker: Gen-Sheng Feng, PhD | ||
| speaker_title: Professor, Department of Pathology | ||
| talk_title: "\"Multi-omics Studies of Liver Tumors and Microenvironment\"" | ||
| photo: gen-sheng_feng.jpg | ||
| keywords: scRNA-seq, Immunotherapy, SHP2, Oncogenic Signaling | ||
| website: https://sites.google.com/ucsd.edu/fenglivercancerresearch/home | ||
| - date: "2022-09-07" | ||
| # flyer: | ||
| # recording: | ||
| talks: | ||
| - speaker: Alon Goren, PhD | ||
| speaker_title: Associate Professor, Department of Medicine | ||
| talk_title: "\"Systematic analysis of the impact of short tandem repeats on gene expression\"" | ||
| photo: alon_goren.jpg | ||
| keywords: Chromatin Regulatory Networks, Genetic Variation, Epigenomic Mechanisms | ||
| website: https://goren-lab.github.io/ | ||
| - speaker: Yatish Turakhia, PhD | ||
| speaker_title: Assistant Professor, Electrical and Computer Engineering | ||
| talk_title: "\"Pandemic-scale Phylogenetics\"" | ||
| photo: yatish_turakhia.jpg | ||
| website: https://turakhia.eng.ucsd.edu/ | ||
| - date: "2022-09-14" | ||
| # flyer: | ||
| # recording: | ||
| talks: | ||
| - speaker: Graham McVicker, PhD | ||
| speaker_title: Associate Professor, Salk Institute | ||
| talk_title: "\"New methods to understand the impact of genetic variation on gene regulation\"" | ||
| photo: graham_mcvicker.jpg | ||
| keywords: Genomics, Epigenomics | ||
| website: http://mcvicker.salk.edu/ | ||
| - speaker: Jill Mesirov, PhD | ||
| speaker_title: Professor, Department of Medicine, Division of Genomics and Precision Medicine | ||
| talk_title: "\"Computational Genomic Approaches to the Understanding and Treatment of Cancer\"" | ||
| photo: jill_mesirov.jpg | ||
| keywords: Functional Data, Signatures, Machine Learning, Accessible Software | ||
| website: https://mesirovlab.org/ | ||
| - speaker: TBD | ||
| --- |
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