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16 Open 10 Closed
16 Open 10 Closed
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Issues list

Fix the CI
#33 opened Nov 4, 2024 by johnlees
Sometimes sketchlib dist duplicate lines in the output
#30 opened Oct 29, 2024 by valflanza
1
Parallelise 3di encoding engineering fixing a speed issue
#26 opened Sep 13, 2024 by johnlees
@johnlees @vrbouza
Possible nthash improvement
#23 opened Aug 5, 2024 by johnlees
Dereplication of genomes functionality adding a new feature
#21 opened Jul 22, 2024 by johnlees
@johannahelene
3
Stream distances engineering fixing a speed issue
#18 opened May 8, 2024 by johnlees
@johnlees
.skm file format on disk engineering fixing a speed issue
#17 opened Apr 29, 2024 by johnlees
1
HDF5 <-> .skm/.skd converter wontfix This will not be worked on
#16 opened Apr 29, 2024 by johnlees
Gene hashing research testing an algorithm idea
#15 opened Apr 22, 2024 by johnlees
1
Check comparison of different sketch sizes research testing an algorithm idea
#14 opened Apr 21, 2024 by johnlees
1
Add operations on .skd files functionality adding a new feature good first issue Good for newcomers
#12 opened Apr 21, 2024 by johnlees
3 of 4 tasks
@johannahelene
Add a stripped back CUDA module (dist.cu) functionality adding a new feature
#7 opened Apr 20, 2024 by johnlees
@johnlees
Add some testing and CI good first issue Good for newcomers
#6 opened Apr 20, 2024 by johnlees
1
Add option to reorder sketches in skd file functionality adding a new feature good first issue Good for newcomers
#5 opened Apr 20, 2024 by johnlees
@johannahelene
Add sparse queries functionality adding a new feature
#2 opened Apr 20, 2024 by johnlees
2
Test read input functionality adding a new feature good first issue Good for newcomers
#1 opened Apr 20, 2024 by johnlees
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