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Update Generate.md
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camillebrianceau authored Dec 5, 2023
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4 changes: 2 additions & 2 deletions docs/Preprocessing/Generate.md
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Options:

- `--participants_tsv` (str) is the path to a tsv file containing the subjects/sessions list for data generation.
- `--n_subjects` (int) number of subjects per label in the synthetic dataset. Default: `300`.
- `--n_subjects` (int) number of subjects per label in the synthetic dataset. The number of subjects cannot be higher than the number of subjects in the baseline caps dataset. Default: `300`.
- `--preprocessing` (str) preprocessing pipeline used in the input `caps_directory`. Default: `t1-linear`.
- `--mask_path` (str) Path to the atrophy masks used to generate the two labels.
Default will download masks based on AAL2 in `clinicadl/resources/masks`.
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Options:

- `--participants_tsv` (str) is the path to a tsv file containing the subjects/sessions list for data generation.
- `--n_subjects` (int) number of subjects per label in the synthetic dataset. Default: `300`.
- `--n_subjects` (int) number of subjects per label in the synthetic dataset. The number of subjects cannot be higher than the number of subjects in the baseline caps dataset. Default: `300`.
- `--preprocessing` (str) preprocessing pipeline used in the input `caps_directory`. Default: `t1-linear`.
- `--mean` (float) Mean value of the gaussian noise added to images. Default: `0`.
- `--sigma` (float) Standard deviation of the gaussian noise added to images. Default: `0.5`.
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