[DOC] Update the Python version used for creating the conda environme…

…nt in README (#600)

* update python version used for creating conda env in README

* investigate

* fix

.github/workflows/test_cli.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run CLI tests
         run: |
-          make env.conda
           source /builds/miniconda3/etc/profile.d/conda.sh
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_generate.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run tests for generate task
         run: |
-          make env.conda
           source /builds/miniconda3/etc/profile.d/conda.sh
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_interpret.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run tests for Interpret task on GPU
         run: |
-          make env.conda
           source "${HOME}/miniconda3/etc/profile.d/conda.sh"
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_predict.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run tests for predict task
         run: |
-          make env.conda
           source /builds/miniconda3/etc/profile.d/conda.sh
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_prepare_data.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run tests for prepare data task
         run: |
-          make env.conda
           source /builds/miniconda3/etc/profile.d/conda.sh
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_quality_checks.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run tests for Quality Check
         run: |
-          make env.conda
           source /builds/miniconda3/etc/profile.d/conda.sh
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_random_search.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run Random Search tests on GPU
         run: |
-          make env.conda
           source "${HOME}/miniconda3/etc/profile.d/conda.sh"
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_resume.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run resume tests on GPU
         run: |
-          make env.conda
           source "${HOME}/miniconda3/etc/profile.d/conda.sh"
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_train.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run tests for Train on GPU
         run: |
-          make env.conda
           source "${HOME}/miniconda3/etc/profile.d/conda.sh"
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_transfer_learning.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run tests for Transfer Learning on GPU
         run: |
-          make env.conda
           source "${HOME}/miniconda3/etc/profile.d/conda.sh"
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

.github/workflows/test_tsvtools.yml

@@ -36,8 +36,8 @@ jobs:
           python-version: ${{ env.PYTHON_VERSION }}
       - name: Run tests for TSV tools
         run: |
-          make env.conda
           source /builds/miniconda3/etc/profile.d/conda.sh
+          make env.conda
           conda activate "${{ github.workspace }}"/env
           make install
           cd tests

README.md

@@ -33,34 +33,33 @@
 ## About the project
 
 This repository hosts ClinicaDL, the deep learning extension of [Clinica](https://github.com/aramis-lab/clinica), 
-a python library to process neuroimaging data in [BIDS](https://bids.neuroimaging.io/index.html) format.
+a Python library to process neuroimaging data in [BIDS](https://bids.neuroimaging.io/index.html) format.
 
 > **Disclaimer:** this software is **under development**. Some features can
 change between different releases and/or commits.
 
-To access the full documentation of the project, follow the link 
-[https://clinicadl.readthedocs.io/](https://clinicadl.readthedocs.io/). 
+To access the full documentation of the project, follow the link [https://clinicadl.readthedocs.io/](https://clinicadl.readthedocs.io/). 
 If you find a problem when using it or if you want to provide us feedback,
 please [open an issue](https://github.com/aramis-lab/ad-dl/issues) or write on
 the [forum](https://groups.google.com/forum/#!forum/clinica-user).
 
 ## Getting started
+
 ClinicaDL currently supports macOS and Linux.
 
 We recommend to use `conda` or `virtualenv` for the installation of ClinicaDL
-as it guarantees the correct management of libraries depending on common
-packages:
+as it guarantees the correct management of libraries depending on common packages:
 
 ```{.sourceCode .bash}
-conda create --name ClinicaDL python=3.8
+conda create --name ClinicaDL python=3.10
 conda activate ClinicaDL
 pip install clinicadl
 ```
 
-## Tutorial 
-Visit our [hands-on tutorial web
-site](https://aramislab.paris.inria.fr/clinicadl/tuto) to start
-using **ClinicaDL** directly in a Google Colab instance!
+## Tutorial
+
+Visit our [hands-on tutorial web site](https://aramislab.paris.inria.fr/clinicadl/tuto)
+to start using **ClinicaDL** directly in a Google Colab instance!
 
 ## Related Repositories