split dwi tests between preproc and proc

aramis-lab · Oct 10, 2023 · 7cad54c · 7cad54c
1 parent 4439121
commit 7cad54c
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Showing 3 changed files with 50 additions and 3 deletions.
diff --git a/.github/workflows/test_pipelines_dwi.yml b/.github/workflows/test_pipelines_dwi.yml
@@ -25,7 +25,8 @@ jobs:
       - name: Run tests for dwi pipelines
         run: ./scripts/run_nonregression.sh
         env:
-          MODALITY: dwi
+          TEST: dwi/test_pipelines.py
+          MODALITY: dwi_pipelines
           WORKSPACE: ${{ github.workspace }}
 
   test-pipelines-dwi-Linux:
@@ -39,5 +40,6 @@ jobs:
       - name: Run tests for dwi pipelines
         run: ./scripts/run_nonregression.sh
         env:
-          MODALITY: dwi
+          TEST: dwi/test_pipelines.py
+          MODALITY: dwi_pipelines
           WORKSPACE: ${{ github.workspace }}
diff --git a/.github/workflows/test_pipelines_dwi_preprocessing.yml b/.github/workflows/test_pipelines_dwi_preprocessing.yml
@@ -0,0 +1,45 @@
+name: DWI Preprocessing Pipelines Tests
+
+on:
+  push:
+    branches: [dev]
+  pull_request:
+    branches: [dev]
+
+permissions:
+  contents: read
+
+concurrency:
+  group: '${{ github.workflow }} @ ${{ github.event.pull_request.head.label || github.head_ref || github.ref }}'
+  cancel-in-progress: true
+
+jobs:
+  test-pipelines-dwi-preprocessing-MacOS:
+    runs-on:
+      - self-hosted
+      - macOS
+    timeout-minutes: 720
+    steps:
+      - uses: actions/checkout@v4
+      - uses: snok/install-poetry@v1
+      - name: Run tests for dwi preprocessing pipelines
+        run: ./scripts/run_nonregression.sh
+        env:
+          TEST: dwi/preprocessing
+          MODALITY: dwi_preprocessing
+          WORKSPACE: ${{ github.workspace }}
+
+  test-pipelines-dwi-preprocessing-Linux:
+    runs-on:
+      - self-hosted
+      - Linux
+    timeout-minutes: 720
+    steps:
+      - uses: actions/checkout@v4
+      - uses: snok/install-poetry@v1
+      - name: Run tests for dwi preprocessing pipelines
+        run: ./scripts/run_nonregression.sh
+        env:
+          TEST: dwi/preprocessing
+          MODALITY: dwi_preprocessing
+          WORKSPACE: ${{ github.workspace }}
diff --git a/scripts/run_nonregression.sh b/scripts/run_nonregression.sh
@@ -49,5 +49,5 @@ poetry run pytest --verbose \
     --basetemp=$TMP_DIRECTORY \
     --junitxml=./test-reports/non_regression_$MODALITY_mac.xml \
     --disable-warnings \
-    ./nonregression/pipelines/$MODALITY
+    ./nonregression/pipelines/$TEST