Fix RuntimeWarning in CLI due to empty option groups (#1022)

aramis-lab · Nov 29, 2023 · 40c260a · 40c260a
1 parent d7f39b0
commit 40c260a
Show file tree

Hide file tree

Showing 3 changed files with 1 addition and 3 deletions.
diff --git a/clinica/pipelines/machine_learning/classification_cli.py b/clinica/pipelines/machine_learning/classification_cli.py
@@ -50,7 +50,6 @@
     type=click.Choice(T1_VOLUME_ATLASES),
     help="One of the atlases generated by t1-volume or pet-volume pipeline.",
 )
-@cli_param.option_group.common_pipelines_options
 @option.global_option_group
 @option.n_procs
 def cli(

diff --git a/clinica/pydra/t1_linear/t1_linear_cli.py b/clinica/pydra/t1_linear/t1_linear_cli.py
@@ -15,7 +15,6 @@
 @click.command(name=pipeline_name, hidden=True)
 @cli_param.argument.bids_directory
 @cli_param.argument.caps_directory
-@cli_param.option_group.common_pipelines_options
 @option.global_option_group
 @option.n_procs
 def cli(

diff --git a/clinica/pydra/t1_volume/register_dartel/cli.py b/clinica/pydra/t1_volume/register_dartel/cli.py
@@ -15,7 +15,7 @@
 @cli_param.argument.bids_directory
 @cli_param.argument.caps_directory
 @cli_param.argument.group_label
-@cli_param.option_group.common_pipelines_options
+# @cli_param.option_group.common_pipelines_options
 # @cli_param.option.subjects_sessions_tsv
 # @cli_param.option.working_directory
 @option.global_option_group