New Specs Prodigy xy file in example_data #55
Workflow file for this run
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| name: Run Tests | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - main | |
| pull_request: | |
| branches: "**" | |
| env: | |
| DISPLAY: "99" | |
| QT_QPA_PLATFORM: "offscreen" | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| max-parallel: 5 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10" | |
| - name: Add conda to system path | |
| run: | | |
| # $CONDA is an environment variable pointing to the root of the miniconda directory | |
| echo $CONDA/bin >> $GITHUB_PATH | |
| - name: Get pip cache dir | |
| id: pip-cache | |
| run: | | |
| # echo "::set-output name=dir::$(pip cache dir)" | |
| echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT | |
| - name: Get conda package dir | |
| id: conda-cache | |
| run: | | |
| # echo "::set-output name=dir::$(conda info --json | python -c "import sys, json; print(json.load(sys.stdin)['pkgs_dirs'][0])")" | |
| echo "dir=$(conda info --json | python -c "import sys, json; print(json.load(sys.stdin)['pkgs_dirs'][0])")" | |
| - name: Cache conda and PyPI modules | |
| uses: actions/cache@v3 | |
| env: | |
| cache-name: cache-conda-and-pypi | |
| with: | |
| path: | | |
| ${{ steps.pip-cache.outputs.dir }} | |
| ${{ steps.conda-cache.outputs.dir }} | |
| key: ${{ runner.os }}-build-${{ env.cache-name}}-${{ hashFiles('**/environment*.yml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-conda | |
| - name: Install dependencies | |
| run: | | |
| conda env create --quiet --file environment.yml | |
| - name: Source environment, test with pytest and generate coverage | |
| run: | | |
| source activate arpes | |
| conda env update --file environment-update-test.yml | |
| sudo apt install libxkbcommon-x11-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xinerama0 libxcb-xfixes0 | |
| echo "Installed dependencies as below" | |
| pip freeze | |
| echo "Now running tests" | |
| python -m pytest -c pytest-config/pytest-coverage-codecov.ini | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| files: ./coverage.xml | |
| flags: unittests | |
| env_vars: OS,PYTHON | |
| fail_ci_if_error: true | |
| verbose: true |