Built site for gh-pages

.nojekyll

@@ -1 +1 @@
-ca9edca4
+be29ebca

search.json

@@ -284,7 +284,7 @@
     "href": "slides/slide1.html#summary",
     "title": "Drawing plots with ggplot2",
     "section": "Summary",
-    "text": "Summary\n\n\ndata as data.frame\na set of aesthetic mappings between variables in the data and visual properties\nat least one layer (usually geom_ or stat_ functions) which describes what to render\nthe coordinate system (explained next)"
+    "text": "Summary\n\n\ndata as data.frame\na set of aesthetic mappings between variables in the data and visual properties\nat least one layer (usually geom_ or stat_ functions) which describes what to render\nthe coordinate system (explained later)"
   },
   {
     "objectID": "slides/slide1.html#ggplot2-cheatsheet",

sitemap.xml

@@ -18,7 +18,7 @@
   </url>
   <url>
     <loc>https://anu-bdsi.github.io/workshop-data-vis-R1/slides/slide1.html</loc>
-    <lastmod>2024-04-08T04:27:10.468Z</lastmod>
+    <lastmod>2024-04-09T23:43:03.398Z</lastmod>
   </url>
   <url>
     <loc>https://anu-bdsi.github.io/workshop-data-vis-R1/index.html</loc>

slides/slide2.html

@@ -7480,7 +7480,7 @@
   };
 
   // Store cell data
-  globalThis.qwebrCellDetails = [{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-1"},"code":"ghist <- ggplot(penguins, aes(bill_depth_mm)) +\n  geom_histogram() \n\nlayer_data(ghist, 1)","id":1},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-2"},"code":"ggplot(penguins, aes(bill_depth_mm)) +\n  geom_histogram(aes(y = after_stat(density))) ","id":2},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-3"},"code":"library(palmerpenguins)\nggplot(penguins, aes(island)) +\n  geom_bar()\n\nggplot(penguins, aes(island)) +\n  stat_count(geom = \"point\", size = 3)","id":3},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"true","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-4"},"code":"penguins_summary <- penguins %>% \n  count(sex, species)\n\npenguins_summary","id":4},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-5"},"code":"ggplot(penguins_summary, \n       aes(x = species, y = n)) +\n  geom_col() ","id":5},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-6"},"code":"penguins_summary\n\nggplot(penguins_summary, aes(x = species, y = n, fill = sex)) +\n  geom_col(position = \"stack\") # default position","id":6},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-7"},"code":"ggplot(penguins_summary,\n       aes(species, n, fill = sex)) +\n  geom_col(position = \"dodge\")","id":7},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-8"},"code":"ggplot(penguins_summary, \n       aes(species, n, fill = sex)) +\n  geom_col(position = position_dodge(preserve = \"single\"))","id":8},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-9"},"code":"ggplot(penguins_summary, \n       aes(species, n, fill = sex)) +\n  geom_col(position = position_dodge2(padding = 0.1))","id":9},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-10"},"code":"ggplot(penguins_summary, \n       aes(species, n, fill = sex)) +\n  geom_col(position = \"fill\")","id":10},{"options":{"comment":"","read-only":"false","message":"true","warning":"true","out-height":"","out-width":"700px","autorun":"false","context":"interactive","results":"markup","classes":"","output":"true","dpi":72,"fig-height":5,"fig-width":7,"fig-cap":"","label":"unnamed-chunk-11"},"code":"ggplot(penguins_summary, \n       aes(species, n, fill = sex)) +\n  geom_col(position = \"fill\") +\n  coord_polar(\"y\")","id":11}];
+  globalThis.qwebrCellDetails = [{"id":1,"code":"ghist <- ggplot(penguins, aes(bill_depth_mm)) +\n  geom_histogram() \n\nlayer_data(ghist, 1)","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-1","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":2,"code":"ggplot(penguins, aes(bill_depth_mm)) +\n  geom_histogram(aes(y = after_stat(density))) ","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-2","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":3,"code":"library(palmerpenguins)\nggplot(penguins, aes(island)) +\n  geom_bar()\n\nggplot(penguins, aes(island)) +\n  stat_count(geom = \"point\", size = 3)","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-3","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":4,"code":"penguins_summary <- penguins %>% \n  count(sex, species)\n\npenguins_summary","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-4","fig-width":7,"message":"true","output":"true","autorun":"true","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":5,"code":"ggplot(penguins_summary, \n       aes(x = species, y = n)) +\n  geom_col() ","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-5","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":6,"code":"penguins_summary\n\nggplot(penguins_summary, aes(x = species, y = n, fill = sex)) +\n  geom_col(position = \"stack\") # default position","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-6","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":7,"code":"ggplot(penguins_summary,\n       aes(species, n, fill = sex)) +\n  geom_col(position = \"dodge\")","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-7","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":8,"code":"ggplot(penguins_summary, \n       aes(species, n, fill = sex)) +\n  geom_col(position = position_dodge(preserve = \"single\"))","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-8","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":9,"code":"ggplot(penguins_summary, \n       aes(species, n, fill = sex)) +\n  geom_col(position = position_dodge2(padding = 0.1))","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-9","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":10,"code":"ggplot(penguins_summary, \n       aes(species, n, fill = sex)) +\n  geom_col(position = \"fill\")","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-10","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}},{"id":11,"code":"ggplot(penguins_summary, \n       aes(species, n, fill = sex)) +\n  geom_col(position = \"fill\") +\n  coord_polar(\"y\")","options":{"fig-cap":"","results":"markup","dpi":72,"label":"unnamed-chunk-11","fig-width":7,"message":"true","output":"true","autorun":"false","out-width":"700px","read-only":"false","classes":"","comment":"","context":"interactive","fig-height":5,"warning":"true","out-height":""}}];
 
   </script>
   <script type="module">
@@ -9115,7 +9115,7 @@ <h2>Summary</h2>
 <section id="exercise-time" class="title-slide slide level1 center" data-background-color="#F5EDDE">
 <h1>Exercise time</h1>
 <p><a href="https://anu-bdsi.github.io/workshop-intro-R/materials.html#tabset-1-1-tab" class="f-headline"><i class="fas fa-laptop-code"></i></a></p>
-<p></p><div class="countdown" id="timer_0cf77172" data-update-every="1" tabindex="0" style="right:0;bottom:0;font-size:3em;"> <div class="countdown-controls"><button class="countdown-bump-down">−</button><button class="countdown-bump-up">+</button></div> <code class="countdown-time"><span class="countdown-digits minutes">30</span><span class="countdown-digits colon">:</span><span class="countdown-digits seconds">00</span></code> </div><p></p>
+<p></p><div class="countdown" id="timer_bad0e488" data-update-every="1" tabindex="0" style="right:0;bottom:0;font-size:3em;"> <div class="countdown-controls"><button class="countdown-bump-down">−</button><button class="countdown-bump-up">+</button></div> <code class="countdown-time"><span class="countdown-digits minutes">30</span><span class="countdown-digits colon">:</span><span class="countdown-digits seconds">00</span></code> </div><p></p>
 
 <div class="quarto-auto-generated-content">
 <p><img src="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAKsAAADICAMAAACgVuHfAAAAM1BMVEVHcEy+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw6+gw4LZbQGAAAAEHRSTlMA4PBgIBCgQMCAMNCwcFCQyHondAAAAAlwSFlzAAAsSgAALEoBd3p0TQAADB1JREFUeJztnemyrCoMRhUHnOX9n/aUCApkIPZgu6vO9+PWPd1tsxpDQgKyi6IoBv18NYXVaP6Clg21+hOopttYe/DyM+VZy+7RslbqWfvi2fqLrOsfYu3+CGv9h1i1Y9Xg3WdJPYV1Bq8AdQ9h1aYBr6XyjOOPWVuT71jPan7F2tT2v8aU9p8D+MCpzk1efsZalOM6FLNtfmnLFrx/yvsq77vulzbGqG2Il8oYxTGErODNe9QFEzrWxbe/Z61P1JJ1Bv3vWYvpYOV9gWNtfsfarFIbcKz6Z6y6jJMUZnD9mnU1iVQFPuPV7wmXdRzgzRvU6LnvfNeOU18xTj5g7cCbd8knpgzno1i3aEDffiv9BNbOmLYZM17gMaxrUTTt32Ddb34rY51vY8Vs0k8EF/BOJMfa38ZaYrAybazljayDmcBrV1jNzvr6l1xQe2WanNhvwJqx7Lcpu7kuGmXbWdpSQJzmi/exbpjjNv0rJyVrLM0Xm9tYoxKvYifVVL54H2sRzP4yzmAsw3zxGEg3sp51/hK8F4vIF+9jHYLlk1xbk8E+u7PeUH6NVyRGrmhB5Ys769dLmgNYk+Kba7F88S7Wqu9OXNW1vWZcAZEvbv9qbioVD671XIRM8sXDXvbc4R5W7ZNV8M6m4xeQ+eLJmvF5n2FVQ0uw1ke61egKzxdP1kxm9gEtRg3bsBmxr1pNVCPE8sU7Wfvd8nq0ElHGSb/PF8MpgbqzX93Qx6xt8KvYTi2SL3Y3shKqVDjoe8+1WuKHsdpZSupNfb64Bp97Amsx+J5VBwSWLz6CtWjGNPZjegar28KSKf89g9XPq/jZ1zNYK2Omes3F+WewTmobQ4tCI9qhnfLXS5yu9N5MbCq+s6aR95n6z/od/Wf9jv4a6/xr1gWb0ULtWeGPWSc+Bng9gbXOTQScfsuq7fS0NzYJKIYMwm9Za6Xaqim3guzSqlx5/sc2EFXkVvB2rB+zNkE5iC92P2BsBRvF+R0kD2Ctz4Q76wu+wzqs2/eqac6MlmIOawN8VvAV1noNjHDkcOtwb1Zmt8s3WKukfWMmak24KdOPlqwdfJa16VXavEXoiSG+lS/9FX3Flbo9a/Uh1roFlIda8vb6zgVvAH1uTqgnABgbI9HANgjHW1k1MFOoEZ36bQsCW40oYwAHa/kmawWWhHCVFSBqzNjYgla+/U/UMiownmmpdJjp0b7QUCbyUdYrpMbSRsOs8eygx4HeZG3mi6RWtFNg9RYr4U6/RfsG6+ukm6brffMy63ukhnG4pF5krd8mfYH2XN9CHTUuLpheEx4eCJnra8efIzU2PIAGKF1m/SzpJVpjH9iYpKy5CcqLtNScEbKK9+ZIJii7VNf3fSt/mBmEXkwXWOGMH5ea5mN6r3vpz0tCLyYxqzDsdzNIQ/Qq7N9MMAv26HFVD1nYL1cys6pa0U9tOYcb7H1Ed3bsLUkcfza/HmaJOTDhwbFye6AFToru0ORHbwW27JdRLiy7t3zIko7QQjkNfdZ6kexBwJpzUmrCv5ZXU02Z7kVdWMAK6+ALTyq986iWlR9siAsLnjFJk17eSY39pTuPaZh5a0hdmNtUXgPWhSPN19SEaio2ZreRJRDP8DF2uhXNQZtQup+mnvY/gTjfENltyHr0VQN29HmVrcREhzOwdiJTGWjjLc/fGz5z6l+Fe1XdZaug3RqMcUEVdruONN4j9vuEIEhiBvSWsHVULzLyi1wGZbx+n2H4nLz7OqS5qcqDwg5Nv0Tya1HjdWBlwLp39gDaEIwlQTASd68Gxut2xhq3pnBuLtfhp5RkLC2yOZT7Rsk9Sn56d7IWRTgpPFklg74mbIyVJI6EY21nHUJWh++2ywkGfS7wMJL0wzHWlqMTy6KIJi/N3PeCqRM0q4uSzHuape99RFk84rWHeUXzUJE1XAjWx62HEwJSlBtMMbZzmMCrUKIIU0RHJhnZwQ50eAmk2sq3n/W6RuptghqGElTfBiosRerSHESUq+eN9wxX2eqbcCyheXM+ETJ54z17M1clYuezPGkhroKRlxfH0zCFs1zuwBJJMYNtKk/LXn6Ggn3PAZYdymn5pjZa1n/kLg9SQizjgqJpRYsVZJVR5S8PIqstFgmSE5xWvKyCWoKopNkGA0ritKx02tw4X6kRNImHljnX2FF1kt0xrrnlqKzKEpREdbXuzzx1wvSxSLKsFZQKteYw7PmbZIcOut/EfgOrOvnyaBIQlt/qeXIdpzr5L/eKSkCyzDdSPU9uUJRn1XkJH6sNHEEyWlV7pcQCzNmo9ULvpubsAeMn+c2xRQqWB0CMp0TEfqmfQIKxm6nGK0XjMdCwQ0vJqmgo3KGJadFqj+tMFT2L1h5RtgYXiGg1TSqhRUl9Z1qkc7DNZxAjGmVpiaaktOTl+9Cu4ifWhxMdWk2OlmxKRssYz/6BNZlanSaBGaynxYIUMaIwISstdU+TenMdk0g1HdEAN1inNCgO67U8sYyS5FyBYT6BwssCg83kKmqa96iihetWKe7UL1rrRbAKOhw3OkqzrcHWh3m8qS2PfbOCcI6nFmQC57lQw9RrPTRaz9L1yVBqOvJYLVqASwHbWetma72dUzKvFn3eXpRmB5oSX3FxWxRWLwjuuNc2P0Dn2+gMGRfqleRr+R0601nhkpbNDdAPC3cNoUtoF2ipSVKJJNkTMOFLtC1FKqNFb0nhTSD9GTYGkA1maMmmZLTM5St2JIw1AiqM8rRMUwJaPo8tQcpSOCNgqwQNGg/5piJaLEpl8lg75GEDxMuRQFC8lsem0T+fx7bQC1gptLvT5iqfEBnVvZDHDvO0G8MoyWNJw1yl9e3G/hEJkrPWc9/nd+FL1FOP9dTBjyj3WQbh8xiFi0gjEoYy8ln0cGLgjnQ6/YOfxZZX8tBiAEsJmaETqzm2qU8BBf57ddCxp4dhdvckl+NeSeon6uCHuktKxjWNZ8eGy51k9iIgldJq5Ngs261UT1VBx0bT2HweS5NKaOPL/dEZXLe6IbX/b/IgEEubIc3Rppe7rpy5bnXxwN0BnbRG0srmUWR8AzuWnI/fDgpkunUfUv5AOPC3WNB9XqApWsi0D5mM+zDV8t3qhpT/MTB+p6U4NmVGFC8NoauQvqfsbYWZSig7pFym02AJTNm6M62G5ZV8zJRtb8Melc25nrTDhT0i3lmJcr1Xk9NAXkq2HIvJDwrb47laux1eozNMfK8Oq2n2PaNlm0sieVTrPbmBtctagQ/CF3e+d8noq+HQ4XSESDtsMhZQHFZ6dP+7eazcT5zB3BoikanG2m/86U2FtChpIfa/wbRj763sVHrvChPDSmhJUhltePmOimUDmGx0U1FJj6dlSYts3Tu63KEiYQeXJVORwdRgboo3RYkuCceX76gKhjhSezfGMwAi65bnsZglpJPx66g4LFLEvjTvj59MR/PY+gVUDwuSnXo+FwZlG1xjDb3Lg0tsVXJ3QVdRPWyH9Nuex5Jf2OhtF9gCSbKqXkT1c0L+UXugd/LYPRUZX1pz3pNZJVytt/YI8lh5XWY3VfRGSuSmLpPscnSc0/lAokXhA0Qsf86hwPZwUqlXa1ysofIkkVw6u2a6liE1uUryGdYujg0gd2/Yrh14UrZCHzwnILQ1Rv7AELJrkYV/RDSt61TmL9lckDv3FO/azN2PLAGzW2+pmTNTxPJPSICbdHHej2xxdIfVXnCMWblaQfyVL+RTxozh3fH29alOjb81bIqe1I4d9TNCQ2rQHviE/PFBof9BjLXzJ6g3SP0gqjP5rar8QZqvyY+CqBt0xDOmeWxUl4lcgfdz5RsP2HHymUjkEc4JP7LvIjhSJSI9Hr0iPdn78qlBdN92WtQjFd5QYvfq7emzYyrVMZ6itpeOJN3fjj593J4v3f6gJb/dkNvizcgbKh3IPil/2DhZPWZ03JdvjH5M3jFevosH6YgNwy/paPTKcSLH4H/jD0a9pCMM4Fs/oI6fd4+hxjrqPpJu+ilpEYaBXEnjLGyyvu27ygQtq2Di+EPSIqLFdleFay3yHRzfUzDZKtclNIZhPheFfmWnqaK1+HI73mU74SWcL146e+jLAlvYQ13bTH+HqAfe0z2GT8GdkycMx3eOqvi+hqXvt8c4297t6f2UiqL4B+gIYbc2SwmBAAAAAElFTkSuQmCC" class="slide-logo"></p>