fixed R check

YuLab-SMU · Jan 2, 2019 · aaca2d3 · aaca2d3
1 parent 53f845d
commit aaca2d3
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Showing 5 changed files with 8 additions and 2 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: seqcombo
 Title: Visualization Tool for Sequence Recombination and Reassortment
-Version: 1.5.0
+Version: 1.5.1
 Authors@R: person("Guangchuang", "Yu", email = "[email protected]", role = c("aut", "cre"))
 Description: Provides useful functions for visualizing sequence recombination
     and virus reassortment events.

diff --git a/Makefile b/Makefile
@@ -41,7 +41,7 @@ clean:
 	$(RM) -r $(PKGNAME).Rcheck/
 
 release:
-	git checkout RELEASE_3_7;\
+	git checkout RELEASE_3_8;\
 	git fetch --all
 
 update:

diff --git a/NAMESPACE b/NAMESPACE
@@ -18,6 +18,7 @@ importFrom(Biostrings,width)
 importFrom(cowplot,plot_grid)
 importFrom(dplyr,group_by)
 importFrom(dplyr,group_by_)
+importFrom(dplyr,n)
 importFrom(dplyr,select)
 importFrom(dplyr,summarize)
 importFrom(dplyr,summarize_)

diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,7 @@
+# seqcombo 1.5.1
+
++ fixed R check by import `dplyr::n` (2019-01-02, Wed)
+
 # seqcombo 1.1.1
 
 + better simplot implementation (2018-01-09, Fri)

diff --git a/R/seqdiff.R b/R/seqdiff.R
@@ -54,6 +54,7 @@ nucleotide_difference <- function(x, reference=1) {
 ##' @importFrom dplyr group_by
 ##' @importFrom dplyr summarize
 ##' @importFrom dplyr select
+##' @importFrom dplyr n
 nucleotide_difference_count <- function(x, width=50, keep0=FALSE) {
     n <- max(x$position)
     bin <- rep(1:ceiling(n/width), each=width)