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31 Open 70 Closed
31 Open 70 Closed
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Issues list

BiocParallel Errors
#107 opened Jan 4, 2022 by TeodoraTockovska
2
CellRanger Metrics
#106 opened Jul 26, 2021 by CisnerosFernandez
QC matrix
#105 opened Jan 23, 2021 by HaniJieunKim
Cell Ranger alignment stats
#104 opened Apr 12, 2020 by iwillham
3
Calling scone with run=TRUE Error
#102 opened Jul 30, 2019 by e-arslan
1
Error in get_normalized due to no imputation / return_norm = "no"
#101 opened Dec 8, 2018 by diyadas
3
Error with memory
#100 opened Aug 28, 2018 by jgarces02
Error in score_matrix(expr = adjusted, eval_pcs = eval_pcs, eval_proj = eval_proj, : NA/Inf/NaN Expression Values
#99 opened Aug 20, 2018 by diyadas
friendly error message when negcon params are all FALSE
#96 opened Mar 13, 2018 by allonw
'k' must satisfy 0 < k < min(nrow(A), ncol(A)) enhancement
#93 opened Jan 19, 2018 by mbcole
@mbcole
sconeReport
#92 opened Dec 28, 2017 by mbcole
@mbcole
R-squared
#91 opened Nov 22, 2017 by drisso
1
Add Helpful Message when Control Gene Lists are Malformed enhancement
#90 opened Nov 7, 2017 by mbcole
@mbcole
ezbake error when fnr_maxiter = 0
#87 opened Jun 23, 2017 by allonw
scran "sizes" parameter
#86 opened Jun 14, 2017 by drisso
4
Warning when using default zero option bug
#85 opened May 3, 2017 by drisso
Scaling Function Arguments
#84 opened Apr 6, 2017 by mbcole
SconeExperiment for signature matrix should accept character vectors for poscon and negcon
#83 opened Apr 4, 2017 by drisso
Report fails when expression feature is constant
#79 opened Feb 8, 2017 by mbcole
@mbcole
Memory issues with parallel computing enhancement
#76 opened Nov 14, 2016 by drisso
Additional tests
#71 opened Oct 12, 2016 by drisso
bplapply memory issue when running scone(run=TRUE)
#69 opened Sep 19, 2016 by ckmah
3
Correct for QC and RUV simultaneously enhancement
#68 opened Sep 2, 2016 by drisso
Allow multiple covariates enhancement
#67 opened Sep 2, 2016 by drisso
3
sample filter: default hard cutoffs
#66 opened Aug 18, 2016 by allonw
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