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Help to understand group sashimi plot #120

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Sahu-Mousumi opened this issue Jan 29, 2024 · 1 comment
Open

Help to understand group sashimi plot #120

Sahu-Mousumi opened this issue Jan 29, 2024 · 1 comment

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@Sahu-Mousumi
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Sahu-Mousumi commented Jan 29, 2024

as-fig
Hello
I have a sashimi plot generated for two groups as attached.

What is the difference between average read count 0 (as found for control) and null (in Sc) for exon 2 and 3?

Thank you
MS

@EricKutschera
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If there are no reads for that junction for the group then nothing is shown. If there are reads, but the average count for the group is zero after rounding then 0 is shown

Here's a related post: #112

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