JBrowse2 component integration #1263
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dmfalke
reviewed
Nov 8, 2024
| // Could use wdk usePromise? or react-query? | ||
| useEffect(() => { | ||
| // Fetch the config JSON | ||
| fetch('/jbrowse2/config.json') |
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Ideally, this would be a configuration value that gets set in configer. Something like jbrowse2_root_url = /jbrowse2. Then, you can update __SITE_CONFIG__ in EbrcWebsiteCommon/Model/lib/conifer/roles/conifer/templates/EbrcWebsiteCommon/appBase.html.j2 to include that value. Then, update packages/libs/web-common/src/config.ts to export that value. Finally, you can import that here via import { jbrowse2RootUrl } from 'web-common/lib/config';.
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You will need this in your
genomics-site/.env