Proposal to split semicolon delimited values in full ISA-Tab, if needed #3
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Last time I looked at the CBIL code (a few months ago) the semi-colon splitting seemed to be there for ontology term values at least. Not sure how useful my suggestions will be. There are remaining unresolved issues around microsatellite polymorphism data handling. These are low throughput genotypes, recorded as nucleotide lengths for the two diploid copies of the marker. So "128;130" for example. Not splitting them at load-time isn't all bad at the moment. It means that the EDA download files are closer to the format users will want (STRUCTURE format). |
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Bare bones and some pseudo code. Just for reference if we need to go this way.