Acoustic Species ID (#96)

Co-authored-by: suranganaaryal123 <[email protected]> Co-authored-by: hejonathan <[email protected]> Co-authored-by: TQ Zhang <[email protected]> Co-authored-by: Ludwig von Schoenfeldt <[email protected]> Co-authored-by: Sean Perry <[email protected]>
UCSD-E4E · Jul 16, 2024 · 1579f97 · 1579f97
1 parent bd00a73
commit 1579f97
Show file tree

Hide file tree

Showing 22 changed files with 172 additions and 38 deletions.
diff --git a/images/AUC.png b/images/AUC.png
diff --git a/images/ROC_Curve_DA.png b/images/ROC_Curve_DA.png
diff --git a/images/ROC_Curve_original_grid.png b/images/ROC_Curve_original_grid.png
diff --git a/images/antthrush_tinamou.png b/images/antthrush_tinamou.png
diff --git a/images/asid_corr_graphvis.png b/images/asid_corr_graphvis.png
diff --git a/images/conf_filter_explanation.jpeg b/images/conf_filter_explanation.jpeg
diff --git a/images/confidence_filter.png b/images/confidence_filter.png
diff --git a/images/data analysis.png b/images/data analysis.png
diff --git a/images/distribution_DA.png b/images/distribution_DA.png
diff --git a/images/motmot_barbet.png b/images/motmot_barbet.png
diff --git a/images/night.png b/images/night.png
diff --git a/images/no_filter.png b/images/no_filter.png
diff --git a/images/occurance_filter.png b/images/occurance_filter.png
diff --git a/images/owl_owl.png b/images/owl_owl.png
diff --git a/images/sampleui1.png b/images/sampleui1.png
diff --git a/images/sampleui2.png b/images/sampleui2.png
diff --git a/images/sampleui3.png b/images/sampleui3.png
diff --git a/images/sampleui4.png b/images/sampleui4.png
diff --git a/images/sampleui5.png b/images/sampleui5.png
diff --git a/images/sim1.png b/images/sim1.png
diff --git a/images/sim2.png b/images/sim2.png
diff --git a/project_aid.tex b/project_aid.tex
@@ -1,40 +1,174 @@
-% To create a slide, use the following:
-% \begin{frame}{TITLE}
-%     BODY
-% \end{frame}
-
-% To create a slide with a bullet list, use the following:
-% \begin{frame}{TITLE}
-%     \begin{itemize}
-%         \item ITEM 1
-%         \item ITEM 2
-%     \end{itemize}    
-% \end{frame}
-
-% To create a slide with numbered list, use the following:
-% \begin{frame}{TITLE}
-%     \begin{enumerate}
-%         \item ITEM 1
-%         \item ITEM 2
-%     \end{enumerate}
-% \end{frame}
-
-% To create a slide with a graphic:
-% 1. Add the graphic to this folder (named picture.png)
-% 2. Use the following:
-% \begin{frame}{TITLE}
-%     \centering
-%     \includegraphics[height=0.7\textheight,width=0.7\textwidth,keepaspectratio]{picture.png}
-% \end{frame}
+% Slides for 2024-07-16
+\begin{frame}{Results: Labelling Party - ROC Curve}
+    \centering
+    \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/ROC_Curve_original_grid.png}
+\end{frame}
 
+\begin{frame}{Results: Labelling Party - AUC vs Time}
+    \centering
+    \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/AUC.png}
+\end{frame}
+
+\begin{frame}{Results: Same model with strong Data Augmentation}
+    \centering
+    \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/ROC_Curve_DA.png}
+\end{frame}
+
+\begin{frame}{Results: Same model with strong Data Augmentation}
+    \centering
+    \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/distribution_DA.png}
+\end{frame}
+
+\begin{frame}{Class Correlation Matrix}
+    \begin{itemize}
+        \item Compute R for every pair of classes across all instances
+        \item Goal: Find correlations (confusions)
+    \end{itemize}
+\end{frame}
+
+% picture of matrix, without filtering the zeros
+\begin{frame}{Results: Class Correlation Matrix}
+    \centering
+    \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/no_filter.png}
+\end{frame}
+
+% picture of matrix, with filtering the zeros
+\begin{frame}{Added filtering to remove correlation from near zero}
+    \begin{columns}
+        \begin{column}{0.5\textwidth}
+            \centering
+            \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/conf_filter_explanation.jpeg}
+        \end{column}
+        \begin{column}{0.5\textwidth}
+            \centering
+            \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/confidence_filter.png}
+        \end{column}
+    \end{columns}
+\end{frame}
+
+
+% picture of matrix, with filtering the number of datapoints
+\begin{frame}{Results: Class Correlation Matrix}
+    \centering
+    White = Not enough datapoints
+    \\
+    \centering
+    \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/occurance_filter.png}
+\end{frame}
+
+% picture of matrix, with filtering the number of datapoints
+\begin{frame}{Results: Class Correlation Matrix}
+    \centering
+    \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/night.png}
+\end{frame}
+
+% Initial analysis: night vs. day & similar species
 % To create a slide with two columns, use the following:
-% \begin{frame}{TITLE}
-%     \begin{columns}
-%         \begin{column}{0.5\textwidth}
-%             COLUMN 1 BODY
-%         \end{column}
-%         \begin{column}{0.5\textwidth}
-%             COLUMN 2 BODY
-%         \end{column}
-%     \end{columns}
-% \end{frame}
+\begin{frame}{Examples of Related Species}
+    \begin{columns}
+        \begin{column}{0.5\textwidth}
+            \centering
+            \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/sim1.png}
+        \end{column}
+        \begin{column}{0.5\textwidth}
+            \centering
+            \includegraphics[height=0.9\textheight,width=0.9\textwidth,keepaspectratio]{images/sim2.png}
+        \end{column}
+    \end{columns}
+\end{frame}
+
+% Begin TQ's section
+\begin{frame}{Correlation Graph}
+    \centering Idea: Use correlations as adjacency
+\end{frame}
+
+\begin{frame}{Interactive Graph Visualization}
+    \includegraphics[height=0.9\textheight, width=0.9\textwidth]{images/asid_corr_graphvis.png}
+\end{frame}
+
+\begin{frame}{Groups Make Sense}
+    \begin{columns}
+        \begin{column}{0.5\textwidth}
+            \includegraphics[height=0.7\textheight, width=1\textwidth]{images/antthrush_tinamou.png}
+        \end{column}
+        \begin{column}{0.5\textwidth}
+            \begin{itemize}
+                \item Black-faced Antthrush: \href{https://xeno-canto.org/712297}{https://xeno-canto.org/712297}
+                \item Little Tinamou: \href{https://xeno-canto.org/821655}{https://xeno-canto.org/821655}
+            \end{itemize}
+        \end{column}
+    \end{columns}
+\end{frame}
+
+\begin{frame}{Groups Make Sense}
+    \begin{columns}
+        \begin{column}{0.5\textwidth}
+            \includegraphics[height=0.7\textheight, width=1\textwidth]{images/owl_owl.png}
+        \end{column}
+        \begin{column}{0.5\textwidth}
+            \begin{itemize}
+                \item Tawny-bellied Screech Owl: \href{https://xeno-canto.org/862344}{https://xeno-canto.org/862344}
+                \item Ferruginous Pygmy Owl: \href{https://xeno-canto.org/914412}{https://xeno-canto.org/914412}
+                \item \emph{Differ only in frequency!}
+            \end{itemize}
+        \end{column}
+    \end{columns}
+\end{frame}
+
+\begin{frame}{Interpretation/Future application}
+    \begin{itemize}
+        \item Model confusion makes sense
+        \item See where it's getting confused
+    \end{itemize}
+\end{frame}
+%surangana's part
+
+\begin{frame}{Past week}
+    \begin{itemize}
+        \item Data Analysis
+    \end{itemize}
+    \centering
+    \includegraphics[width=0.6\textwidth]{images/data analysis.png}
+\end{frame}
+
+\begin{frame}{Past week}
+    \begin{itemize}
+        \item Created Sample UI Designs
+    \end{itemize}
+    \centering
+    \includegraphics[width=0.6\textwidth]{images/sampleui1.png}
+\end{frame}
+
+\begin{frame}{Past week}
+    \begin{minipage}[b]{0.45\textwidth}
+        \centering
+        \includegraphics[width=\textwidth]{images/sampleui2.png}
+    \end{minipage}
+    \hspace{0.05\textwidth}
+    \begin{minipage}[b]{0.45\textwidth}
+        \centering
+        \includegraphics[width=\textwidth]{images/sampleui5.png}
+    \end{minipage}
+\end{frame}
+
+\begin{frame}{Past week}
+    \begin{minipage}[b]{0.45\textwidth}
+        \centering
+        \includegraphics[width=\textwidth]{images/sampleui4.png}
+    \end{minipage}%
+    \hspace{0.05\textwidth}
+    \begin{minipage}[b]{0.45\textwidth}
+        \centering
+        \includegraphics[width=\textwidth]{images/sampleui3.png}
+    \end{minipage}
+\end{frame}
+
+\begin{frame}{Upcoming week}
+    \begin{itemize}
+        \item Iterate Desktop designs
+        \item Desktop Development start
+        \item Use CCM to identify simliar species
+        \item Verify clips from new model
+        \item Look deeper into cnn+transformer
+    \end{itemize}
+\end{frame}