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Explain text predictions of Keras classifiers #325

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Explain text predictions of Keras classifiers #325

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Commits on Jul 1, 2019

  1. WeightedSpan commment

    @teabolt
    teabolt committed Jul 1, 2019
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Commits on Jul 2, 2019

  1. End-to-end simple text (breaks image)

    @teabolt
    teabolt committed Jul 2, 2019
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Commits on Jul 4, 2019

  1. Merge branch 'keras-gradcam-img' of https://github.com/teabolt/eli5 i… 

    …nto keras-gradcam-text
    @teabolt
    teabolt committed Jul 4, 2019
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  2. Fix image explanations ('regression')

    @teabolt
    teabolt committed Jul 4, 2019
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Commits on Jul 5, 2019

  1. Merge branch 'keras-gradcam-img' of https://github.com/teabolt/eli5 i… 

    …nto keras-gradcam-text
    @teabolt
    teabolt committed Jul 5, 2019
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  2. New args for text explanations (mypy and docstring)

    @teabolt
    teabolt committed Jul 5, 2019
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  3. Move span builder code to function. Add construct_document function

    @teabolt
    teabolt committed Jul 5, 2019
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  4. Refactor and generalize _validate_doc

    @teabolt
    teabolt committed Jul 5, 2019
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  5. Refactor _get_activation_layer. Add layer condition for text

    @teabolt
    teabolt committed Jul 5, 2019
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  6. Comment about WeightedSpan

    @teabolt
    teabolt committed Jul 5, 2019
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  7. Disable validation of retrieved activation_layer

    @teabolt
    teabolt committed Jul 5, 2019
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Commits on Jul 8, 2019

  1. Add comment about counterfactual explanations

    @teabolt
    teabolt committed Jul 8, 2019
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  2. Add compute_weights to keras package

    @teabolt
    teabolt committed Jul 8, 2019
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  3. Merge branch 'keras-gradcam-img' of https://github.com/teabolt/eli5 i… 

    …nto keras-gradcam-text
    @teabolt
    teabolt committed Jul 8, 2019
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  4. Add post-padding removal

    @teabolt
    teabolt committed Jul 8, 2019
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Commits on Jul 9, 2019

  1. Put text and image explanation code into separate functions

    @teabolt
    teabolt committed Jul 9, 2019
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  2. Add function to upsize 1D arrays

    @teabolt
    teabolt committed Jul 9, 2019
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  3. Comment about scipy resample, K.gradients

    @teabolt
    teabolt committed Jul 9, 2019
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  4. Add relu and counterexplanation args

    @teabolt
    teabolt committed Jul 9, 2019
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Commits on Jul 14, 2019

  1. Update lib docs, docstring (heatmap and explanation details)

    @teabolt
    teabolt committed Jul 14, 2019
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  2. Update tests/utils_image.py (use count_nonzero instead of sum) 

    Co-Authored-By: Mikhail Korobov <[email protected]>
    @teabolt @kmike
    teabolt and kmike committed Jul 14, 2019
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  3. Hardcoding to explain RNN's (with rank 1 activations)

    @teabolt
    teabolt committed Jul 14, 2019
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  4. Merge branch 'keras-gradcam-img' of https://github.com/teabolt/eli5 i… 

    …nto keras-gradcam-text
    @teabolt
    teabolt committed Jul 14, 2019
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Commits on Jul 15, 2019

  1. Fix failing tests for image explanations

    @teabolt
    teabolt committed Jul 15, 2019
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  2. Fix mypy for image explanations

    @teabolt
    teabolt committed Jul 15, 2019
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  3. Comments

    @teabolt
    teabolt committed Jul 15, 2019
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Commits on Jul 16, 2019

  1. Fix image docs. Run tutorial notebook in update script

    @teabolt
    teabolt committed Jul 16, 2019
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  2. Comment about running sections of notebook script

    @teabolt
    teabolt committed Jul 16, 2019
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  3. Make image arg required for image-based explanations

    @teabolt
    teabolt committed Jul 16, 2019
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Commits on Jul 17, 2019

  1. Update image tutorial to use image arg

    @teabolt
    teabolt committed Jul 17, 2019
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  2. Organise repeated explain_prediction* params

    @teabolt
    teabolt committed Jul 17, 2019
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  3. Remove target_names mentions (moved to GitHub issue)

    @teabolt
    teabolt committed Jul 17, 2019
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  4. Update comments and docstring

    @teabolt
    teabolt committed Jul 17, 2019
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  5. Rename arg 'estimator' to 'model'

    @teabolt
    teabolt committed Jul 17, 2019
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  6. Explanation modifier args. Move heatmap normalization to formatters

    @teabolt
    teabolt committed Jul 17, 2019
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  7. Comments

    @teabolt
    teabolt committed Jul 17, 2019
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  8. Support for character-based highlighting

    @teabolt
    teabolt committed Jul 17, 2019
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  9. Fix mypy, add asserts (CI fail)

    @teabolt
    teabolt committed Jul 17, 2019
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Commits on Jul 18, 2019

  1. Refactor lmap calculation. Non-2D layer image formatting.

    @teabolt
    teabolt committed Jul 18, 2019
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  2. Decouple layer getter and layer search

    @teabolt
    teabolt committed Jul 18, 2019
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  3. Handle pre-padding

    @teabolt
    teabolt committed Jul 18, 2019
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  4. Make span builder use document

    @teabolt
    teabolt committed Jul 18, 2019
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  5. Move text methods into keras.text module

    @teabolt
    teabolt committed Jul 18, 2019
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  6. Fix image tests. Reduce required area percent in test

    @teabolt
    teabolt committed Jul 18, 2019
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Commits on Jul 23, 2019

  1. Move reusable GradCAM code to a top level gradcam module

    @teabolt
    teabolt committed Jul 23, 2019
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  2. Create neural nets package. Move text and gradcam explanation code to… 

    … general gradcam functions.
    @teabolt
    teabolt committed Jul 23, 2019
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Commits on Jul 24, 2019

  1. Fix broken local imports

    @teabolt
    teabolt committed Jul 24, 2019
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  2. Add mypy if TYPE_CHECKING comment

    @teabolt
    teabolt committed Jul 24, 2019
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  3. Move DESCRIPTION to nn.gradcam

    @teabolt
    teabolt committed Jul 24, 2019
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  4. Formatting. Separate target prediction auto getter

    @teabolt
    teabolt committed Jul 24, 2019
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  5. Move tests. Comment TODO's for tests.

    @teabolt
    teabolt committed Jul 24, 2019
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Commits on Jul 25, 2019

  1. Add integration test setup for text

    @teabolt
    teabolt committed Jul 25, 2019
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  2. Take tokens as list or numpy array. Validate

    @teabolt
    teabolt committed Jul 25, 2019
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  3. Take padding character/value as str or int

    @teabolt
    teabolt committed Jul 25, 2019
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Commits on Jul 26, 2019

  1. Unit tests for nn.text

    @teabolt
    teabolt committed Jul 26, 2019
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  2. Improve 1D array resizing method\asdfa

    @teabolt
    teabolt committed Jul 26, 2019
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  3. Mypy for nn.text. Fix CI

    @teabolt
    teabolt committed Jul 26, 2019
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  4. Forgot to rename pad_x to pad_value (ci fix)

    @teabolt
    teabolt committed Jul 26, 2019
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Commits on Jul 30, 2019

  1. Apply Grad-CAM to layers with single dimension (dense, final rnn, etc)

    @teabolt
    teabolt committed Jul 30, 2019
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  2. Add mypy annotations

    @teabolt
    teabolt committed Jul 30, 2019
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  3. Add text to keras library docs

    @teabolt
    teabolt committed Jul 30, 2019
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  4. Add nn package to docs

    @teabolt
    teabolt committed Jul 30, 2019
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Commits on Jul 31, 2019

  1. Add integration test for keras binary text classification

    @teabolt
    teabolt committed Jul 31, 2019
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  2. Update docstrings of nn and keras packages

    @teabolt
    teabolt committed Jul 31, 2019
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Commits on Aug 1, 2019

  1. CI fix: ignore deps, mypy, batching error

    @teabolt
    teabolt committed Aug 1, 2019
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  2. Add notebook used to train keras text model

    @teabolt
    teabolt committed Aug 1, 2019
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  3. Add tutorial file for keras text

    @teabolt
    teabolt committed Aug 1, 2019
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  4. Clean up keras comments, targets validation

    @teabolt
    teabolt committed Aug 1, 2019
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Commits on Aug 2, 2019

  1. Move targets validation to nn package

    @teabolt
    teabolt committed Aug 2, 2019
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  2. Add multiclass model in a keras test

    @teabolt
    teabolt committed Aug 2, 2019
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  3. Ignore estimator files for nodeps tox envs

    @teabolt
    teabolt committed Aug 2, 2019
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  4. Mypy (fix CI)

    @teabolt
    teabolt committed Aug 2, 2019
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Commits on Aug 6, 2019

  1. Merge branch 'keras-gradcam-img-v2' of https://github.com/teabolt/eli5 … 

    …into keras-gradcam-text
    @teabolt
    teabolt committed Aug 6, 2019
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  2. Merge branch 'keras-gradcam-img-v2' of https://github.com/teabolt/eli5 … 

    …into keras-gradcam-text
    @teabolt
    teabolt committed Aug 6, 2019
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  3. Remove _validate_heatmap

    @teabolt
    teabolt committed Aug 6, 2019
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  4. Merge branch 'keras-gradcam-img-v2' of https://github.com/teabolt/eli5 … 

    …into keras-gradcam-text
    @teabolt
    teabolt committed Aug 6, 2019
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  5. Add tokens validation tests

    @teabolt
    teabolt committed Aug 6, 2019
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  6. Explain sentiment classifier in keras text tutorial

    @teabolt
    teabolt committed Aug 6, 2019
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Commits on Aug 7, 2019

  1. Add multiclass model to tutorial. Add tutorial to docs

    @teabolt
    teabolt committed Aug 7, 2019
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Commits on Aug 8, 2019

  1. Merge branch 'keras-gradcam-img-v2' of https://github.com/teabolt/eli5 … 

    …into keras-gradcam-text
    @teabolt
    teabolt committed Aug 8, 2019
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Commits on Aug 9, 2019

  1. Ignore keras estimator .py files in no deps tests (CI fix)

    @teabolt
    teabolt committed Aug 9, 2019
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  2. Text tutorial: multiclass explanations, explain_prediction

    @teabolt
    teabolt committed Aug 9, 2019
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  3. Improve automatic layer search. Add tests

    @teabolt
    teabolt committed Aug 9, 2019
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  4. Clean up nn.text comments, rename arg.

    @teabolt
    teabolt committed Aug 9, 2019
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  5. Explain Grad-CAM formula in keras lib docs

    @teabolt
    teabolt committed Aug 9, 2019
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  6. Document interpolation_kind in single docstring, reference in others

    @teabolt
    teabolt committed Aug 9, 2019
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  7. Merge branch 'keras-gradcam-img-v2' of https://github.com/teabolt/eli5 … 

    …into keras-gradcam-text
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    teabolt committed Aug 9, 2019
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Commits on Aug 10, 2019

  1. Merge branch 'keras-gradcam-img-v2' of https://github.com/teabolt/eli5 … 

    …into keras-gradcam-text
    @teabolt
    teabolt committed Aug 10, 2019
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  2. Add 'return None' statement for mypy (CI fix)

    @teabolt
    teabolt committed Aug 10, 2019
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  3. Blank line between :: and code block in docs (CI fix)

    @teabolt
    teabolt committed Aug 10, 2019
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Commits on Aug 12, 2019

  1. Merge branch 'master' of https://github.com/teabolt/eli5 into keras-g… 

    …radcam-text
    @teabolt
    teabolt committed Aug 12, 2019
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  2. Test that can take dense/final RNN layers

    @teabolt
    teabolt committed Aug 12, 2019
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  3. Add targets validation tests

    @teabolt
    teabolt committed Aug 12, 2019
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  4. Remove _get_temporal_length. Pass tokens to nn.text without batch

    @teabolt
    teabolt committed Aug 12, 2019
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  5. Test invalid 'padding' argument

    @teabolt
    teabolt committed Aug 12, 2019
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  6. Test invalid heatmap for format_as_image

    @teabolt
    teabolt committed Aug 12, 2019
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  7. Change formatters.image public API (simplify underlying functions). T… 

    …ests
    @teabolt
    teabolt committed Aug 12, 2019
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  8. Update image tutorial with image API changes and counterfactual/relu … 

    …args
    @teabolt
    teabolt committed Aug 12, 2019
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  9. Add relu and counterfactual integration tests

    @teabolt
    teabolt committed Aug 12, 2019
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  10. Mypy updates to image code

    @teabolt
    teabolt committed Aug 12, 2019
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  11. Restructure and add to text tutorial

    @teabolt
    teabolt committed Aug 12, 2019
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Commits on Aug 13, 2019

  1. Split parts of _validate_doc() into _validate_doc_shape() (CI fix)

    @teabolt
    teabolt committed Aug 13, 2019
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  2. Add descriptions to text tutorial

    @teabolt
    teabolt committed Aug 13, 2019
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Commits on Aug 14, 2019

  1. Indentation for long import 

    Co-Authored-By: Konstantin Lopuhin <[email protected]>
    @teabolt @lopuhin
    teabolt and lopuhin authored Aug 14, 2019
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  2. Wording: accuracy -> score. 

    Co-Authored-By: Konstantin Lopuhin <[email protected]>
    @teabolt @lopuhin
    teabolt and lopuhin authored Aug 14, 2019
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  3. Apply co-authored commits to .ipynb

    @teabolt
    teabolt committed Aug 14, 2019
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  4. Print python and package versions at runtime for tutorial

    @teabolt
    teabolt committed Aug 14, 2019
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  5. Replace os.getcwd with a working way to reference files in a module

    @teabolt
    teabolt committed Aug 14, 2019
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  6. Link to training notebooks in tutorial

    @teabolt
    teabolt committed Aug 14, 2019
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  7. Print accuracy clearly for text models

    @teabolt
    teabolt committed Aug 14, 2019
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  8. More details on relu and counterfactual in tutorial

    @teabolt
    teabolt committed Aug 14, 2019
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  9. Show padding for dense layer explanation

    @teabolt
    teabolt committed Aug 14, 2019
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  10. Remove section on interpolation_kind from tutorial

    @teabolt
    teabolt committed Aug 14, 2019
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Commits on Aug 15, 2019

  1. Add .layer attribute to Explanation

    @teabolt
    teabolt committed Aug 15, 2019
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  2. Remove own input shape validation and let Keras do it

    @teabolt
    teabolt committed Aug 15, 2019
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  3. Search for layer backwards by default. Refactor image layer autogetter.

    @teabolt
    teabolt committed Aug 15, 2019
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  4. Separate pad_value arg into pad_value (number) and pad_token (str)

    @teabolt
    teabolt committed Aug 15, 2019
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  5. Remove padding argument and cut pre and post padding automatically

    @teabolt
    teabolt committed Aug 15, 2019
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  6. Update tutorial and tests (not working)

    @teabolt
    teabolt committed Aug 15, 2019
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Commits on Aug 17, 2019

  1. Fix integration tests by hard-coding to pick embedded layer

    @teabolt
    teabolt committed Aug 17, 2019
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  2. Clean up. CI fixes (improve text layer chooser)

    @teabolt
    teabolt committed Aug 17, 2019
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  3. Update tutorial, docs

    @teabolt
    teabolt committed Aug 17, 2019
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  4. Add tests, validation (coverage)

    @teabolt
    teabolt committed Aug 17, 2019
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  5. Misplaced argument (CI fix)

    @teabolt
    teabolt committed Aug 17, 2019
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  6. Clarify comment for index_from in text model files

    @teabolt
    teabolt committed Aug 17, 2019
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  7. Generalise check for space in tokens 

    Co-Authored-By: Konstantin Lopuhin <[email protected]>
    @teabolt @lopuhin
    teabolt and lopuhin authored Aug 17, 2019
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  8. Update comments, remove TODO's

    @teabolt
    teabolt committed Aug 17, 2019
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Commits on Aug 19, 2019

  1. Update pad_value docstring 

    Co-Authored-By: Konstantin Lopuhin <[email protected]>
    @teabolt @lopuhin
    teabolt and lopuhin authored Aug 19, 2019
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  2. Make layer pickers for text and image raise error if can not find layer

    @teabolt
    teabolt committed Aug 19, 2019
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  3. Merge branch 'keras-gradcam-text' of https://github.com/teabolt/eli5 … 

    …into keras-gradcam-text
    @teabolt
    teabolt committed Aug 19, 2019
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  4. Update docs. Remove _forward_layers

    @teabolt
    teabolt committed Aug 19, 2019
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  5. Mention about spans list in WeightedSpan

    @teabolt
    teabolt committed Aug 19, 2019
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  6. Fix doc type

    @teabolt
    teabolt committed Aug 19, 2019
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  7. Update old doc comment

    @teabolt
    teabolt committed Aug 19, 2019
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  8. Update text tutorial

    @teabolt
    teabolt committed Aug 19, 2019
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  9. Make layer attr take any type. Pass layer instance

    @teabolt
    teabolt committed Aug 19, 2019
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  10. Update index docs with text changes

    @teabolt
    teabolt committed Aug 19, 2019
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  11. Add gradcam test utils. Move tests from integration to unit in Keras

    @teabolt
    teabolt committed Aug 19, 2019
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Commits on Sep 7, 2019

  1. Rename function. Add tests for package imports

    @teabolt
    teabolt committed Sep 7, 2019
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  2. Move argument validation to relevant modules

    @teabolt
    teabolt committed Sep 7, 2019
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Commits on Sep 9, 2019

  1. Separate out classification-specific code into a function

    @teabolt
    teabolt committed Sep 9, 2019
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  2. Replace mypy annotation K.variable with Any

    @teabolt
    teabolt committed Sep 9, 2019
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Commits on Oct 13, 2019

  1. Add validation for public function arguments

    @teabolt
    teabolt committed Oct 13, 2019
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Commits on Jun 6, 2020

  1. Merge branch 'master' of github.com:teabolt/eli5 into keras-gradcam-text

    @teabolt
    teabolt committed Jun 6, 2020
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Commits on Jul 4, 2020

  1. Fix error formatting in eli5.nn.gradcam

    @teabolt
    teabolt committed Jul 4, 2020
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Commits on Jul 19, 2020

  1. Use multi-backend Keras with TF 1 for tox build

    @teabolt
    teabolt committed Jul 19, 2020
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  2. Update TODO's and FIXME's

    @teabolt
    teabolt committed Jul 19, 2020
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  3. Try to use snap over apt for installing latest cmake

    @teabolt
    teabolt committed Jul 19, 2020
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  4. Use classic confinement for snap

    @teabolt
    teabolt committed Jul 19, 2020
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  5. Install latest CMake version manually

    @teabolt
    teabolt committed Jul 19, 2020
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  6. Install using existing CMake

    @teabolt
    teabolt committed Jul 19, 2020
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  7. Try to install CMake via shell script

    @teabolt
    teabolt committed Jul 19, 2020
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  8. Try to install CMake via pip

    @teabolt
    teabolt committed Jul 19, 2020
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  9. Install sciki-learn version that supports python 2.7

    @teabolt
    teabolt committed Jul 19, 2020
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  10. Install scikit-learn 0.21

    @teabolt
    teabolt committed Jul 19, 2020
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Commits on Jul 20, 2020

  1. Update comments and docs

    @teabolt
    teabolt committed Jul 20, 2020
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Commits on Jul 21, 2020

  1. (Fix install) Install sciki-learn<0.23

    @teabolt
    teabolt committed Jul 21, 2020
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  2. Fix up and re-run keras notebooks

    @teabolt
    teabolt committed Jul 21, 2020
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Commits on Jul 23, 2020

  1. Keras docs: Explain cases where original GradCAM formula isn't followed

    @teabolt
    teabolt committed Jul 23, 2020
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