Adding all TRIQS files

CITATIONS.bib

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+
+TRIQS is a part of our scientific work and we would appreciate if projects
+using it will include a citation to TRIQS. In order to help you, we provide this
+BibTeX digest of the papers relevant for the various TRIQS modules.
+
+--------------------------------------------------------------------------------
+THE TRIQS PROJECT BASIC COMPONENTS (Green's functions, HDF archives, ...)
+--------------------------------------------------------------------------------
+
+A companion paper will be published soon
+@Misc{triqs_project,
+  author = {Ferrero, Michel and Parcollet, Olivier},
+  title = {{TRIQS}: a {T}oolbox for {R}esearch in {I}nteracting {Q}uantum {S}ystems},
+  url = {http://ipht.cea.fr/triqs}
+}
+
+
+--------------------------------------------------------------------------------
+EXTENSION MODULES: Hybridization Quantum Monte Carlo
+--------------------------------------------------------------------------------
+
+@Article{triqs_ctqmc_solver_boehnke,
+  volume = {84},
+  month = {Aug},
+  numpages = {13},
+  author = {Boehnke, Lewin and Hafermann, Hartmut and Ferrero, Michel and Lechermann, Frank and Parcollet, Olivier},
+  year = {2011},
+  url = {http://link.aps.org/doi/10.1103/PhysRevB.84.075145},
+  doi = {10.1103/PhysRevB.84.075145},
+  issue = {7},
+  title = {Orthogonal polynomial representation of imaginary-time Green's functions},
+  publisher = {American Physical Society},
+  pages = {075145},
+  journal = {Phys. Rev. B}
+}
+
+@Article{triqs_ctqmc_solver_werner1,
+  volume = {97},
+  month = {Aug},
+  numpages = {4},
+  author = {Werner, Philipp and Comanac, Armin and de' Medici, Luca and Troyer, Matthias and Millis, Andrew J.},
+  year = {2006},
+  url = {http://link.aps.org/doi/10.1103/PhysRevLett.97.076405},
+  doi = {10.1103/PhysRevLett.97.076405},
+  issue = {7},
+  title = {Continuous-Time Solver for Quantum Impurity Models},
+  publisher = {American Physical Society},
+  pages = {076405},
+  journal = {Phys. Rev. Lett.}
+}
+
+@Article{triqs_ctqmc_solver_werner2,
+  volume = {74},
+  month = {Oct},
+  numpages = {13},
+  author = {Werner, Philipp and Millis, Andrew J.},
+  year = {2006},
+  url = {http://link.aps.org/doi/10.1103/PhysRevB.74.155107},
+  doi = {10.1103/PhysRevB.74.155107},
+  issue = {15},
+  title = {Hybridization expansion impurity solver: General formulation and application to Kondo lattice and two-orbital models},
+  publisher = {American Physical Society},
+  pages = {155107},
+  journal = {Phys. Rev. B}
+}
+
+--------------------------------------------------------------------------------
+EXTENSION MODULES: Wien2K interface
+--------------------------------------------------------------------------------
+
+@Article{triqs_wien2k_interface,
+  volume = {80},
+  month = {Aug},
+  numpages = {15},
+  author = {Aichhorn, Markus and Pourovskii, Leonid and Vildosola, Veronica and Ferrero, Michel and Parcollet, Olivier and Miyake, Takashi and Georges, Antoine and Biermann, Silke},
+  year = {2009},
+  url = {http://link.aps.org/doi/10.1103/PhysRevB.80.085101},
+  doi = {10.1103/PhysRevB.80.085101},
+  issue = {8},
+  title = {Dynamical mean-field theory within an augmented plane-wave framework: Assessing electronic correlations in the iron pnictide LaFeAsO},
+  publisher = {American Physical Society},
+  pages = {085101},
+  journal = {Phys. Rev. B}
+}
+
+@Article{triqs_wien2k_full_charge_SC,
+  doi = {10.1103/PhysRevB.84.054529},
+  month = {Aug},
+  issue = {5},
+  author = {Aichhorn, Markus and Pourovskii, Leonid and Georges, Antoine},
+  year = {2011},
+  url = {http://link.aps.org/doi/10.1103/PhysRevB.84.054529},
+  publisher = {American Physical Society},
+  title = {Importance of electronic correlations for structural and magnetic properties of the iron pnictide superconductor LaFeAsO},
+  pages = {054529},
+  journal = {Phys. Rev. B},
+  volume = {84},
+  numpages = {7}
+}

CMakeLists.txt

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+# Path for local cmake modules
+list(APPEND CMAKE_MODULE_PATH ${CMAKE_SOURCE_DIR}/cmake)
+
+# Where is triqs source 
+set(TRIQS_SOURCE_DIR "${CMAKE_SOURCE_DIR}")
+
+# a default version : by default installation in the build dir : 
+# useful for developer : everything is at the same place, easy to clean.
+# pass -DCMAKE_INSTALL_PREFIX to overrule
+set(CMAKE_INSTALL_PREFIX "${CMAKE_BINARY_DIR}/INSTALL_DIR" CACHE PATH "TRIQS install prefix" )
+MESSAGE(STATUS "Installation directory is ${CMAKE_INSTALL_PREFIX}")
+
+# Forbid compilation in the source dir... to force good practice
+# and because I have not checked it (copy of various file before compilation may mess it up), blitz in particular....
+find_package(ForbidCompilationInSource)
+
+# nasty policy for escaping in string....
+cmake_policy(SET CMP0011 OLD)
+cmake_policy(SET CMP0005 NEW)
+cmake_policy(SET CMP0003 NEW) #cmake --help-policy CMP0003 
+
+include (CMakeDetermineSystem)
+cmake_minimum_required(VERSION 2.8.0 FATAL_ERROR)
+project (AllPrograms C CXX Fortran) 
+
+# Check user input for BOOST_SOURCE_DIR
+if(BOOST_SOURCE_DIR)
+ if(NOT IS_ABSOLUTE ${BOOST_SOURCE_DIR})
+  Message(FATAL_ERROR "You must specify an absolute path for BOOST_SOURCE_DIR.")
+ endif(NOT IS_ABSOLUTE ${BOOST_SOURCE_DIR})
+endif(BOOST_SOURCE_DIR)
+
+
+# find the basic libraries from which TRIQS depends and add the def, include and link
+find_package(TRIQS_dep_libs)
+# Add macro definitions needed to use ALPS and dependent libraries
+add_definitions(${ALPS_EXTRA_DEFINITIONS} ) 
+# Add include directories needed to use ALPS and dependent libraries
+include_directories(${ALPS_INCLUDE_DIRS} ${ALPS_EXTRA_INCLUDE_DIRS})
+# Add link directories needed to use ALPS and dependent libraries
+link_directories(${ALPS_LIBRARY_DIRS})
+# reporting
+Message(STATUS " Triqs general lib detection ( but boost ) ")
+Message(STATUS " Adding definitions ${ALPS_EXTRA_DEFINITIONS}" )
+Message(STATUS " Adding include  ${ALPS_INCLUDE_DIRS} ${ALPS_EXTRA_INCLUDE_DIRS} ")
+Message(STATUS " Adding libs ${ALPS_EXTRA_LIBRARIES} " )
+Message(STATUS " Adding library dir ${ALPS_LIBRARY_DIRS} " )
+
+# Final destination of the python modules
+string(REGEX REPLACE ".*/lib" "lib" TRIQS_PYTHON_LIB_DEST_ROOT ${ALPS_PYTHON_SITE_PKG} ) 
+SET( TRIQS_PYTHON_LIB_DEST ${TRIQS_PYTHON_LIB_DEST_ROOT}/pytriqs ) 
+MESSAGE(STATUS "Python modules will be installed in ${CMAKE_INSTALL_PREFIX}/${TRIQS_PYTHON_LIB_DEST}")
+
+# compile boost if necessary
+if(BOOST_SOURCE_DIR)
+ add_subdirectory(foreignlibs/boost)
+ MESSAGE(STATUS  "BOOST_INCLUDE_DIR = ${BOOST_INCLUDE_DIR}")
+ include_directories(${BOOST_INCLUDE_DIR})
+else(BOOST_SOURCE_DIR)
+ FIND_PACKAGE(Boost 1.46.0 REQUIRED )
+ include_directories(${BOOST_INSTALL_ROOT_DIR}/include)
+ set(BOOST_LIBRARY ${BOOST_PYTHON_LIB} ${BOOST_SERIALIZATION_LIB} ${BOOST_FILESYSTEM_LIB} ${BOOST_MPI_LIB})
+endif(BOOST_SOURCE_DIR)
+
+# find cblas.  
+find_package(CBLAS)
+include_directories(${CBLAS_INCLUDE_DIR})             
+
+# The subversion tag. Added to all codes.
+FIND_PACKAGE(Subversion)
+IF(Subversion_FOUND)
+ Subversion_WC_INFO(${CMAKE_CURRENT_SOURCE_DIR} Project)
+ # the additionnal " is needed otherwise the // in URL will be interpreted as a comment in C and the macro will be cut
+ SET (SubversionInfo "Svn version ${Project_WC_REVISION} at URL: \"${Project_WC_URL}\"")
+ add_definitions( -DSVN_VERSION=${SubversionInfo}) # for all compilations
+ENDIF(Subversion_FOUND)
+
+Find_package(Git3) # our local version of FindGit...
+if (GIT_FOUND)
+ GIT_TREE_INFO ( ${CMAKE_SOURCE_DIR} "GIT")
+ MESSAGE(STATUS "Git hash ${GIT_HASH}")
+ MESSAGE(STATUS "Git branches : \n  ${GIT_BRANCHES}")
+ add_definitions( -DGIT_HASH=${GIT_HASH}) # for all compilations
+endif (GIT_FOUND)
+
+# Compute WhoAmI and hostname
+# Change this : make a version module
+EXECUTE_PROCESS(COMMAND hostname OUTPUT_VARIABLE myHostName RESULT_VARIABLE returncode OUTPUT_STRIP_TRAILING_WHITESPACE) 
+EXECUTE_PROCESS(COMMAND id -un OUTPUT_VARIABLE WhoAmI RESULT_VARIABLE returncode OUTPUT_STRIP_TRAILING_WHITESPACE)
+add_definitions( 
+ -D__COMPILEDBY__=${WhoAmI}
+ -D__HOSTNAME__=${myHostName}
+ )
+
+# Tool to help to include the wrappers in main and declare the built-in module
+Find_package(PythonModuleEmbeddingTool)
+
+enable_testing()
+
+# on 64 bit machines
+if (CMAKE_SIZEOF_VOID_P EQUAL 8) # for 64 bits machines
+ MESSAGE( STATUS "64 bit machine : Adding -fpic ")
+ set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -fpic" )
+ add_definitions( -fpic)
+endif (CMAKE_SIZEOF_VOID_P EQUAL 8)
+
+#------------------------
+# Documentation
+##------------------------
+option(Build_Documentation "Build the documentation ?" OFF)
+
+# Built blitz and get corresponding variables
+add_subdirectory(${TRIQS_SOURCE_DIR}/foreignlibs/blitz blitz)
+add_definitions( -DUSE_BLITZ)
+
+# remove the possible horrible pthread bug on os X !!
+# check for clang compiler ?? on gcc, os X snow leopard, it MUST be set 
+# since _REENTRANT is mysteriously set and blitz++ compiles in thread_safe mode
+# and this leads to random stalling of the code....
+IF(${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+ add_definitions( -pthread )
+ENDIF( ${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+
+# General include header
+# remove this dep to C++
+include_directories(${TRIQS_SOURCE_DIR} ${TRIQS_SOURCE_DIR}/foreignlibs ${BLITZ_INCLUDE} ${FFTW_INCLUDE_DIR})
+
+# Create a temporary copy of the python modules so that we can run before installation with the test
+FILE(COPY ${TRIQS_SOURCE_DIR}/pytriqs DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/ FILES_MATCHING PATTERN *.py PATTERN *.svn EXCLUDE )
+if(BOOST_SOURCE_DIR)
+ FILE(COPY ${TRIQS_SOURCE_DIR}/foreignlibs/boost DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/ FILES_MATCHING PATTERN *.py PATTERN *.svn EXCLUDE )
+else(BOOST_SOURCE_DIR)
+ EXEC_PYTHON_SCRIPT ("import boost; print boost.__path__[0]" BOOST_MODULE_DIR)
+ execute_process(COMMAND ln -fs ${BOOST_MODULE_DIR}  ${CMAKE_CURRENT_BINARY_DIR}/pytriqs)
+ install (DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/pytriqs/boost DESTINATION ${TRIQS_PYTHON_LIB_DEST})
+endif(BOOST_SOURCE_DIR)
+
+#------------------------
+# link libs for shared libs or for pytriqs 
+#------------------------
+
+SET( TRIQS_LINK_LIBS 
+ ${BLITZ_LIBRARY}
+ ${PYTHON_LIBRARY} ${PYTHON_EXTRA_LIBS} 
+ ${FFTW_LIBRARIES}
+ ${BOOST_LIBRARY} ${ALPS_EXTRA_LIBRARIES}
+ ${LAPACK_LIBS} 
+ )
+
+#------------------------
+# General triqs libraries
+#------------------------
+add_subdirectory(${TRIQS_SOURCE_DIR}/triqs triqs)  
+SET( TRIQS_LINK_LIBS triqs ${TRIQS_LINK_LIBS})
+
+IF(${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+ list (REMOVE_DUPLICATES TRIQS_LINK_LIBS)
+ENDIF( ${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+
+#------------------------
+# pytriqs modules
+#------------------------
+
+add_subdirectory(${TRIQS_SOURCE_DIR}/pytriqs ) 
+
+#------------------------
+# build pytriqs main or make the script
+#------------------------
+
+add_subdirectory(pytriqs_main bin)
+
+#------------------------
+# Documentation
+#------------------------
+
+#option(Build_Documentation "Build the documentation ?" OFF)
+if (Build_Documentation)
+ add_subdirectory (${TRIQS_SOURCE_DIR}/doc )
+ #add_dependencies(docs_sphinx py_sources)
+endif (Build_Documentation)
+
+#------------------------
+# Packaging
+#------------------------
+
+# make the source package
+SET(TAR_SRC_FILE ${CMAKE_CURRENT_BINARY_DIR}/triqs_src.tgz)
+SET(TAR_SRC_DIRBUILD ${CMAKE_CURRENT_BINARY_DIR}/triqs_src_tgz_build)
+add_custom_command( OUTPUT ${TAR_SRC_FILE} COMMAND mkdir -p  ${TAR_SRC_DIRBUILD} && cd ${TAR_SRC_DIRBUILD} && ${Subversion_SVN_EXECUTABLE} export --force ${Project_WC_URL} triqs_src && tar cvzf ${TAR_SRC_FILE} triqs_src)
+add_custom_target(src_tgz DEPENDS ${TAR_SRC_FILE})
+
+# .deb and dmg
+INCLUDE(InstallRequiredSystemLibraries)
+
+# Prepare the postinstall and preremoval for debian
+configure_file(${TRIQS_SOURCE_DIR}/cmake/prerm.in ${CMAKE_CURRENT_BINARY_DIR}/prerm)
+configure_file(${TRIQS_SOURCE_DIR}/cmake/postinst.in ${CMAKE_CURRENT_BINARY_DIR}/postinst)
+
+SET(CPACK_PACKAGE_NAME "triqs")
+SET(CPACK_PACKAGE_FILE_NAME "triqs")
+SET(CPACK_PACKAGE_VENDOR "The TRIQS collaboration")
+SET(CPACK_DEBIAN_PACKAGE_SECTION "Science")
+SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY "TRIQS, a Toolbox for Research in Quantum Interacting Systems")
+SET(CPACK_PACKAGE_DESCRIPTION_FILE "${CMAKE_CURRENT_SOURCE_DIR}/README.txt")
+SET(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/LICENSE.txt")
+SET(CPACK_PACKAGE_CONTACT "Olivier Parcollet <[email protected]>")
+SET(CPACK_PACKAGE_VERSION_MAJOR "0")
+SET(CPACK_PACKAGE_VERSION_MINOR "9")
+SET(CPACK_PACKAGE_VERSION_PATCH "1-2")
+SET(CPACK_PACKAGE_INSTALL_DIRECTORY "TRIQS_${CPACK_PACKAGE_VERSION_MAJOR}.${CPACK_PACKAGE_VERSION_MINOR}.${CPACK_PACKAGE_VERSION_PATCH}")
+SET(CPACK_STRIP_FILES "bin/pytriqs")
+SET(CPACK_SOURCE_STRIP_FILES "")
+SET(CPACK_PACKAGE_EXECUTABLES "pytriqs" "pytriqs")
+SET(CPACK_DEBIAN_PACKAGE_DEPENDS "openmpi-bin(>=1.4), libblas-dev (>=1.2), ipython (>=0.10), libfftw3-dev (>=3.2)")
+SET(CPACK_DEBIAN_PACKAGE_CONTROL_EXTRA ${CMAKE_CURRENT_BINARY_DIR}/prerm;${CMAKE_CURRENT_BINARY_DIR}/postinst)
+IF(NOT ${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+ SET(CPACK_GENERATOR TGZ DEB)
+ENDIF(NOT ${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+
+INCLUDE(CPack)
+