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18 Open 24 Closed
18 Open 24 Closed
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Issues list

changing displayId of loaded SequenceFeature has strange outcome when later writing to rdf
#42 opened Aug 10, 2011 by nroehner
encrypted ID of SequenceFeature not loaded when using IOTools.fromRdfXml()
#41 opened Aug 10, 2011 by nroehner
java.lang.NoSuchMethodError: java.util.Properties.load(Ljava/io/Reader;)V bug
#40 opened Jun 5, 2011 by mgaldzic 1.0
3
consider new name for SbolService
#39 opened May 31, 2011 by mgaldzic 1.0
fulfill all test cases priority
#38 opened May 30, 2011 by mgaldzic ver 0.5
remove the dependency on BioJava
#35 opened May 14, 2011 by mgaldzic
DNARef in DNASequence should be mutually exclusive with DNASequence
#33 opened Mar 28, 2011 by mgaldzic
1
add read Json method to IOTools to_implement
#30 opened Mar 25, 2011 by mgaldzic ver 0.5
add optional uri references to the DNAComponent future
#29 opened Mar 19, 2011 by mgaldzic
doc should explain why SO type a is a URI javadocs to_implement
#28 opened Mar 19, 2011 by mgaldzic
the "reference" type for dnaRef is underdefined to_implement
#27 opened Mar 19, 2011 by mgaldzic ver 0.5
using SBOLutil.toJson or .toRDF should work for any SBOL object to_implement
#24 opened Mar 18, 2011 by mgaldzic
plan an Exceptions scheme to_implement
#22 opened Mar 16, 2011 by mgaldzic
DnaComponent.equals, "getClass() != obj.getClass()" should be > "obj instanceof DnaComponent" to_implement
#21 opened Mar 16, 2011 by mgaldzic ver 0.5
1
change insertXXX methods to add(object) to_implement
#19 opened Mar 16, 2011 by mgaldzic ver 0.5
use Ham's Naming Convention for Sequence Starts to_implement
#15 opened Mar 16, 2011 by mgaldzic ver 0.5
upgrade to BioJava 3 future
#11 opened Mar 3, 2011 by mgaldzic
SequenceAnnotation start, stop coordinates future validation
#2 opened Feb 10, 2011 by mgaldzic
ProTip! Updated in the last three days: updated:>2024-12-25.