Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

DMDB curie update #606

Draft
wants to merge 1 commit into
base: main
Choose a base branch
from
Draft

DMDB curie update #606

wants to merge 1 commit into from

Conversation

ahueb
Copy link

@ahueb ahueb commented Oct 16, 2024

added utility to normalize all curies in the nodes and links of an indication_paths.json document using translator nodenorm, updated indication_paths.json file included in PR

Total unique normalized IDs: 4857
Total unique failed IDs: 271

95% of curies align with nodenorm

most unresolved curies appear to be interpro

[
  "MESH",
  "InterPro",
  "CHEBI",
  "GO",
  "UniProtKB",
  "Pfam",
  "TIGR",
  "DrugBank",
  "NCBITaxon",
  "REACT"
]

…dication_paths.json document using translator nodenorm
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant