use updated ADKP templates (#143)

Signed-off-by: Abby Vander Linden <[email protected]>
Sage-Bionetworks · Jan 23, 2024 · d5f787b · d5f787b
1 parent 4acb7ba
commit d5f787b
Showing 1 changed file with 109 additions and 19 deletions.
diff --git a/ADKP/dca-template-config.json b/ADKP/dca-template-config.json
@@ -1,43 +1,133 @@
 {
     "manifest_schemas": [
       {
-        "display_name": "Diverse Cohorts Clinical Metadata",
-        "schema_name": "DiverseCohortsClinicalMetadata",
+        "display_name": "assay_16SrRNAseq_metadata_template",
+        "schema_name": "Assay16SrRNAseqMetadataTemplate",
         "type": "record"
       },
       {
-        "display_name": "Diverse Cohorts Biospecimen Metadata",
-        "schema_name": "DiverseCohortsBiospecimenMetadata",
+        "display_name": "assay_ATACSeq_metadata_template",
+        "schema_name": "AssayATACSeqMetadataTemplate",
         "type": "record"
       },
       {
-        "display_name": "WGS Assay Metadata",
-        "schema_name": "WholeGenomeSeqAssayMetadata",
+        "display_name": "assay_autorad_metadata_template",
+        "schema_name": "AssayAutoradMetadataTemplate",
+        "type": "record"
+      },  
+      {
+        "display_name": "assay_bisulfiteSeq_metadata_template",
+        "schema_name": "AssayBisulfiteSeqMetadataTemplate",
+        "type": "record"
+      },      
+      {
+        "display_name": "assay_ChIPSeq_metadata_template",
+        "schema_name": "AssayChIPSeqMetadataTemplate",
         "type": "record"
       },
       {
-        "display_name": "WGS VCF Files",
-        "schema_name": "WholeGenomeSeqVCFFileAnnotations",
-        "type": "file"
+        "display_name": "assay_HIC_metadata_template",
+        "schema_name": "AssayHICMetadataTemplate",
+        "type": "record"
       },
       {
-        "display_name": "WGS Raw Files",
-        "schema_name": "WholeGenomeSeqRawFileAnnotations",
-        "type": "file"
+        "display_name": "assay_metabolomics_metadata_template",
+        "schema_name": "AssayMetabolomicsMetadataTemplate",
+        "type": "record"
       },
       {
-        "display_name": "Bulk RNAseq Assay Metadata",
-        "schema_name": "BulkRNASeqAssayMetadata",
+        "display_name": "assay_methylationArray_metadata_template",
+        "schema_name": "AssayMethylationArrayMetadataTemplate",
         "type": "record"
       },
       {
-        "display_name": "Bulk RNAseq Raw Files",
-        "schema_name": "BulkRNASeqRawFileAnnotations",
-        "type": "file"
+        "display_name": "assay_MRI_metadata_template",
+        "schema_name": "AssayMRIMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_nanostring_metadata_template",
+        "schema_name": "AssayNanostringMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_PET_metadata_template",
+        "schema_name": "AssayPETMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_rnaArray_metadata_template",
+        "schema_name": "AssayRnaArrayMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_rnaSeq_metadata_template",
+        "schema_name": "AssayRNASeqMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_scrnaSeq_metadata_template",
+        "schema_name": "AssayScrnaSeqMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_snpArray_metadata_template",
+        "schema_name": "AssaySnpArrayMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_STARRSeq_metadata_template",
+        "schema_name": "AssaySTARRSeqMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_TMTquantitation_metadata_template",
+        "schema_name": "AssayTMTquantitationMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_wholeExomeSeq_metadata_template",
+        "schema_name": "AssayWholeExomeSeqqMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "assay_wholeGenomeSeq_metadata_template",
+        "schema_name": "AssayWholeGenomeSeqMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "biospecimen_drosophila_metadata_template",
+        "schema_name": "BiospecimenDrosophilaMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "biospecimen_invitro_metadata_template",
+        "schema_name": "BiospecimenInvitroMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "biospecimen_metadata_template",
+        "schema_name": "BiospecimenMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "individual_animal_metadata_template",
+        "schema_name": "IndividualAnimalMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "individual_animal_MODEL-AD_metadata_template",
+        "schema_name": "IndividualAnimalModeladMetadataTemplate",
+        "type": "record"
+      },
+      {
+        "display_name": "individual_human_metadata_template",
+        "schema_name": "IndividualHumanMetadataTemplate",
+        "type": "record"
       },
       {
-        "display_name": "Bulk RNAseq Counts Files",
-        "schema_name": "BulkRNASeqCountsFileAnnotations",
+        "display_name": "file_annotation_template",
+        "schema_name": "FileAnnotationTemplate",
         "type": "file"
       }
     ],