Staging update for EL (#134)

* updated configuration for EL and CB * updated config file
Sage-Bionetworks · Dec 13, 2023 · 6588e7f · 6588e7f
1 parent e2ee2a1
commit 6588e7f
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Showing 3 changed files with 39 additions and 14 deletions.
diff --git a/CB/dca-template-config.json b/CB/dca-template-config.json
@@ -3,12 +3,12 @@
     {
       "display_name": "FileMapToIndividual",
       "schema_name": "FileMapToIndividual",
-      "type": "records"
+      "type": "record"
     },
     {
       "display_name": "Individual Metadata",
       "schema_name": "IndividualMetadata",
-      "type": "records"
+      "type": "record"
     }
   ],
   "service_version": "v23.1.1",

diff --git a/EL/dca-template-config.json b/EL/dca-template-config.json
@@ -1,12 +1,12 @@
 {
   "manifest_schemas": [
     {
-      "display_name": "Biospecimen human",
+      "display_name": "Biospecimen Human",
       "schema_name": "Biospecimenhuman",
       "type": "record"
     },
     {
-      "display_name": "Biospecimen nonHuman",
+      "display_name": "Biospecimen Non-Human",
       "schema_name": "BiospecimennonHuman",
       "type": "record"
     },
@@ -16,7 +16,7 @@
       "type": "record"
     },
     {
-      "display_name": "Individual nonHuman",
+      "display_name": "Individual Non-Human",
       "schema_name": "IndividualnonHuman",
       "type": "record"
     },
@@ -31,11 +31,36 @@
       "type": "file"
     },
     {
-      "display_name": "NAseq",
-      "schema_name": "NAseq",
+      "display_name": "RNAseq",
+      "schema_name": "RNAseq",
+      "type": "file"
+    },
+    {
+      "display_name": "Whole Genome Sequencing",
+      "schema_name": "WholeGenomeSequencing",
+      "type": "file"
+    },
+    {
+      "display_name": "bsSeq",
+      "schema_name": "bsSeq",
+      "type": "file"
+    },
+    {
+      "display_name": "Genotyping",
+      "schema_name": "genotyping",
+      "type": "file"
+    },
+    {
+      "display_name": "Proteomics",
+      "schema_name": "proteomics",
+      "type": "file"
+    },
+    {
+      "display_name": "scRNAseq",
+      "schema_name": "ScRNAseq",
       "type": "file"
     }
   ],
   "service_version": "v23.1.1",
-  "schema_version": ""
-}
+  "schema_version": "v1.3"
+}
diff --git a/EL/dca_config.json b/EL/dca_config.json
@@ -3,12 +3,12 @@
     "name": "EL",
     "synapse_asset_view": "syn51753858",
     "data_model_url": "https://raw.githubusercontent.com/eliteportal/data-models/main/EL.data.model.jsonld",
-    "data_model_info": "",
+    "data_model_info": "https://eliteportal.github.io/data-dictionary/",
     "template_menu_config_file": "https://raw.githubusercontent.com/Sage-Bionetworks/data_curator_config/main/EL/dca-template-config.json",
-    "logo_location": "",
-    "logo_link": "",
+    "logo_location": "https://github.com/eliteportal/data-models/blob/main/assets/ELITE_logo.png",
+    "logo_link": "https://eliteportal.synapse.org/",
     "dcc_help_link": "",
-    "portal_help_link": ""
+    "portal_help_link": "https://help.eliteportal.org/help/"
   },
   "dca": {
     "use_compliance_dashboard": false,
@@ -31,4 +31,4 @@
       "hide_blanks": false
     }
   }
-}
+}