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Added DAG and function runtime information
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ajijohn committed Jul 31, 2020
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -13,7 +13,7 @@ the shell scripts with a sample invocation that you can use can be found in the
### Our Use Case

* Joint variant calling of 1000 Genomes [2] data with [62 individuals](/tasks/Task0/all_eur_afr_pruned.csv). The files are part of AWS Open data initiative, and are located at
[http://1000genomes.s3.amazonaws.com/phase3/data/](http://1000genomes.s3.amazonaws.com/phase3/data/).
[http://1000genomes.s3.amazonaws.com/phase3/data/](http://1000genomes.s3.amazonaws.com/phase3/data/). A DAG for 14 individual run can be found here [](/dag_genomics.pdf).

### Implementation

Expand All @@ -36,7 +36,7 @@ We have run it via AWS amd Azure. Instructions in this repository is for AWS, bu

### Running without SWEEP Platform

Each of the tasks mentioned in the workflow can be run independently using **Docker**.
Each of the tasks mentioned in the workflow can be run independently using **Docker**. For function tasks, the task can be run by invoking the main python file using Python version 3.6 or higher; all the dependeent files are in the corresponding folder as well.

### Running on SWEEP Platform

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