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Practical - University-of-Adelaide-Bx-Masters / BIOTECH-7005-BIOINF-3000

Branches

This repository has 2 branches:

  • main - the default branch, where new development occurs. All changes go into here
  • dave-dev-branch - a branch for unstable development work, so that main will not be left in a broken/untested state

Data files

The "data" directories contains 35 files each:

BIOINF_3000_2022-1
BIOINF_3000_2022-2
BIOINF_3000_2022-3
....
BIOINF_3000_2022-34
BIOINF_3000_2022-35

These correspond to the name of the Virtual Machine you were assigned at the start of the course.

You should ONLY work on the files assigned to you.

Simulated errors

These files have had simulated errors created them, there are two types:

Insertion Severity
XXXXXXX High
lower_case_word -> UPPER_CASE_WORD Low

There are a maximum of 3 types of each error in each file.

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  • Shell 66.0%
  • Python 34.0%