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Pipeline for fastq | bam files which are aligned with BWA, deduplicated with GATK and variants called with GATK or freebayes

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SACGF/bwa_gatk_freebayes-pipeline

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bwa_gatk_freebayes-pipeline

Pipeline for fastq | bam files which are aligned with BWA, deduplicated with GATK and variants called with GATK or freebayes

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Pipeline for fastq | bam files which are aligned with BWA, deduplicated with GATK and variants called with GATK or freebayes

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