Merge pull request #117 from ReproNim/bf-doc

Refer to containers/ subfolder and the correct path in example

README.md

@@ -238,15 +238,15 @@ dataset, **or** the top-level dataset.
 **Option 1: Top level dataset (recommended)**
 
 ```bash
-# Run from ~/top-level-dataset
+# Run from ~/my-experiments/ds000003-qc
 datalad run -m "Downgrade/Freeze mriqc container version" \
-    code/containers/scripts/freeze_versions --save-dataset=. bids-mriqc=0.16.0
+    containers/scripts/freeze_versions --save-dataset=. bids-mriqc=0.16.0
 ```
 
 **Option 2: ///repronim/containers**
 
 ```bash
-# Run from ~/top-level-dataset/code/containers
+# Run from ~/my-experiments/ds000003-qc/containers
 datalad run -m "Downgrade/Freeze mriqc container version" \
     scripts/freeze_versions bids-mriqc=0.16.0
 ```

scripts/replace_neurodesk_urls

@@ -39,7 +39,7 @@ for f in images/neurodesk/*.simg ; do
     else
         echo "OK: $newurl" >&2
         if [ -n "${cloudfronturls[*]}" ]; then
-            echo " INFO: cloudfront url seems to be already known -- $cloudfronturls . Not adding"
+            echo " INFO: cloudfront url seems to be already known -- ${cloudfronturls[*]} . Not adding"
         else
             echo " INFO: adding $newurl to $f"
             git -c annex.alwayscommit=false annex addurl "--file=$f" "$newurl"