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* origin/master: (77 commits) [DATALAD] Configure containerized environment 'nipy-heudiconv' Adding recipe&image for nipy-heudiconv--1.3.1 [DATALAD] Configure containerized environment 'bids-petdeface' Adding recipe&image for bids-petdeface--0.2.1 fix: Correct typo in link to CI badge and workflow result Add 1 NeuroDesk images with 1 registered [DATALAD] Configure containerized environment 'neurodesk-qsmxt' Add 1 NeuroDesk images with 1 registered [DATALAD] Configure containerized environment 'neurodesk-fsl' [DATALAD] Configure containerized environment 'bids-qsirecon' Adding recipe&image for bids-qsirecon--0.23.2 [DATALAD] Configure containerized environment 'bids-validator' Adding recipe&image for bids-validator--1.14.14 Add 1 NeuroDesk images with 1 registered [DATALAD] Configure containerized environment 'neurodesk-vmtk' Add 1 NeuroDesk images with 1 registered [DATALAD] Configure containerized environment 'neurodesk-dsistudio' [DATALAD] Configure containerized environment 'bids-aslprep' Adding recipe&image for bids-aslprep--0.7.3 [DATALAD] Configure containerized environment 'bids-fmriprep' ...
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| Original file line number | Diff line number | Diff line change |
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| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: pennlinc/aslprep:0.7.3 | ||
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| %post | ||
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| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
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| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
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| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: dcanumn/bibsnet:release-3.4.2 | ||
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| %post | ||
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| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
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| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
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||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: cpplab/bidspm:4.0.0 | ||
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| %post | ||
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| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
|
|
||
| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
|
|
||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: nipreps/fmriprep:24.1.0 | ||
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||
| %post | ||
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| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
|
|
||
| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
|
|
||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: nipreps/fmriprep:24.1.1 | ||
|
|
||
| %post | ||
|
|
||
| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
|
|
||
| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
|
|
||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: nipreps/nibabies:24.0.1 | ||
|
|
||
| %post | ||
|
|
||
| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
|
|
||
| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
|
|
||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: nipreps/nibabies:24.1.0 | ||
|
|
||
| %post | ||
|
|
||
| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
|
|
||
| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
|
|
||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: openneuropet/petdeface:0.2.1 | ||
|
|
||
| %post | ||
|
|
||
| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
|
|
||
| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
|
|
||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: pennbbl/qsiprep:0.23.0 | ||
|
|
||
| %post | ||
|
|
||
| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
|
|
||
| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
|
|
||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| # | ||
| # Automagically prepared for ReproNim/containers distribution. | ||
| # See http://github.com/ReproNim/containers for more info | ||
| # | ||
| Bootstrap: docker | ||
| From: pennlinc/qsirecon:0.23.1 | ||
|
|
||
| %post | ||
|
|
||
| # Create commonly present root directories to avoid need in overlays not supported | ||
| # on older systems | ||
| mkdir -p /ihome /data /data2 /zfs /isi /dartfs /dartfs-hpc | ||
|
|
||
| %environment | ||
| export LANG="C.UTF-8" | ||
| export LC_ALL="C.UTF-8" | ||
|
|
||
| # TODO: Take advantage of the fact that it is a bids-app somehow? |
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