Merge pull request #241 from Renumics/story/fine_tune

Story/fine tune

playbook/stories/fine_tune_img.ipynb

@@ -0,0 +1,116 @@
+{
+ "cells": [
+  {
+   "attachments": {},
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "## Easily fine-tune a ViT with images from Bing search"
+   ]
+  },
+  {
+   "attachments": {},
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Use the sliceguard library and Spotlight to fine-tune a ViT model for image classification and detect problematic clusters in a dataset created from Bing search in a few lines of code."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# The Imports\n",
+    "from renumics import spotlight\n",
+    "from sliceguard.data import create_imagedataset_from_bing\n",
+    "from sliceguard.models.huggingface import (\n",
+    "    finetune_image_classifier,\n",
+    "    generate_image_pred_probs_embeddings,\n",
+    ")\n",
+    "from sliceguard.embeddings import generate_image_embeddings"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# Create an Image Dataset from Bing\n",
+    "class_names = [\n",
+    "    \"Blue Tang\",\n",
+    "    \"Clownfish\",\n",
+    "    \"Spotted Eagle Ray\",\n",
+    "    \"Longnose Butterfly Fish\",\n",
+    "    \"Moorish Idol\",\n",
+    "    \"Royal Gramma Fish\",\n",
+    "]\n",
+    "df = create_imagedataset_from_bing(\n",
+    "    class_names, 25, \"data\", test_split=0.2, license=\"Free to share and use\"\n",
+    ")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# Fine-tune a ViT Model with the data (in 1-2 minutes on a GPU)\n",
+    "finetune_image_classifier(\n",
+    "    df[df[\"split\"] == \"train\"],\n",
+    "    model_name=\"google/vit-base-patch16-224-in21k\",\n",
+    "    output_model_folder=\"./model_folder\",\n",
+    "    epochs=15,\n",
+    ")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# Enrich the DataFrame with Predictions, Probabilities and Embeddings\n",
+    "df[\"prediction\"], df[\"probs\"], df[\"embeddings\"] = generate_image_pred_probs_embeddings(\n",
+    "    df[\"image\"].values, model_name=\"./model_folder\"\n",
+    ")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# Check the result and detect problematic clusters\n",
+    "spotlight.show(\n",
+    "    df, layout=\"https://spotlight.renumics.com/resources/image_classification_v1.0.json\"\n",
+    ")"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.10.6"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

playbook/stories/navigating_data_issues.ipynb

@@ -5,7 +5,7 @@
    "metadata": {},
    "source": [
     "## Navigating Data Issues\n",
-    "This notebook is part of an article not published, yet. URL tbd"
+    "This notebook is part of an [article at medium.](https://medium.com/@markus.stoll/navigate-data-issues-d05ae8c45841)\n"
    ]
   },
   {