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Code for Skill and core standardization: An experiment with Oldowan-like flaking systems

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PaST_core_standardization

Code and data for Skill and core uniformity: An experiment with Oldowan-like flaking systems

Getting Started

Please open the Rproj file instead of the Rcode directly to make sure relative paths work!

Dependencies

The code has been successfully executed on JP's MAC and replicated on CL's PC with the following R settings.

  • JP's R setting
R version 4.0.3 (2020-10-10)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS  11.6.6

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] janitor_2.1.0     forcats_0.5.1     rstatix_0.7.0     ggpubr_0.4.0     
[5] ggeffects_1.1.1   glmulti_1.0.8     leaps_3.1         rJava_1.0-4      
[9] Hmisc_4.5-0       Formula_1.2-4     survival_3.2-7    lattice_0.20-41  
[13] factoextra_1.0.7  stringr_1.4.0     DescTools_0.99.41 dplyr_1.0.6      
[17] plyr_1.8.6        tidyr_1.1.3       reshape2_1.4.4    ggplot2_3.3.5    
[21] fortunes_1.5-4   

loaded via a namespace (and not attached):
[1] TH.data_1.0-10      colorspace_2.0-2    ggsignif_0.6.0      ellipsis_0.3.2     
[5] class_7.3-17        modeltools_0.2-23   rio_0.5.16          snakecase_0.11.0   
[9] estimability_1.3    htmlTable_2.2.1     parameters_0.17.0   base64enc_0.1-3    
[13] gld_2.6.2           rstudioapi_0.13     proxy_0.4-25        ggrepel_0.9.1      
[17] flexmix_2.3-18      lubridate_1.7.10    fansi_0.5.0         mvtnorm_1.1-2      
[21] codetools_0.2-16    splines_4.0.3       rootSolve_1.8.2.1   knitr_1.33         
[25] broom_0.7.6         cluster_2.1.0       png_0.1-7           effectsize_0.6.0.1 
[29] compiler_4.0.3      emmeans_1.6.1       backports_1.2.1     assertthat_0.2.1   
[33] Matrix_1.2-18       htmltools_0.5.1.1   tools_4.0.3         coda_0.19-4        
[37] gtable_0.3.0        glue_1.4.2          lmom_2.8            Rcpp_1.0.6         
[41] carData_3.0-4       cellranger_1.1.0    vctrs_0.3.8         betareg_3.1-4      
[45] lmtest_0.9-38       insight_0.17.1      xfun_0.23           openxlsx_4.2.3     
[49] lifecycle_1.0.0     MASS_7.3-53         zoo_1.8-9           scales_1.1.1       
[53] hms_1.0.0           sandwich_3.0-1      expm_0.999-6        RColorBrewer_1.1-2 
[57] curl_4.3.1          Exact_2.1           gridExtra_2.3       rpart_4.1-15       
[61] latticeExtra_0.6-29 stringi_1.6.2       bayestestR_0.11.5   e1071_1.7-6        
[65] checkmate_2.0.0     boot_1.3-25         zip_2.1.1           rlang_0.4.11       
[69] pkgconfig_2.0.3     purrr_0.3.4         htmlwidgets_1.5.3   tidyselect_1.1.1   
[73] magrittr_2.0.1      R6_2.5.0            generics_0.1.0      multcomp_1.4-17    
[77] DBI_1.1.1           pillar_1.6.2        haven_2.3.1         foreign_0.8-80     
[81] withr_2.4.2         abind_1.4-5         datawizard_0.4.1    nnet_7.3-14        
[85] tibble_3.1.3        performance_0.9.0   crayon_1.4.1        car_3.0-10         
[89] utf8_1.2.2          jpeg_0.1-8.1        grid_4.0.3          readxl_1.3.1       
[93] data.table_1.14.0   digest_0.6.27       xtable_1.8-4        stats4_4.0.3       
[97] munsell_0.5.0      
  • CL's R setting
R version 4.1.1 (2021-08-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19043)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.1252 
[2] LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252
[4] LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] betareg_3.1-4     janitor_2.1.0     forcats_0.5.1     rstatix_0.7.0    
[5] ggpubr_0.4.0      sjPlot_2.8.9      ggeffects_1.1.1   Hmisc_4.5-0      
[9] Formula_1.2-4     survival_3.2-11   lattice_0.20-44   factoextra_1.0.7 
[13] stringr_1.4.0     DescTools_0.99.42 dplyr_1.0.7       plyr_1.8.6       
[17] tidyr_1.1.3       reshape2_1.4.4    ggplot2_3.3.5    

loaded via a namespace (and not attached):
 [1] TH.data_1.0-10      minqa_1.2.4         colorspace_2.0-2   
 [4] ggsignif_0.6.3      modeltools_0.2-23   ellipsis_0.3.2     
 [7] class_7.3-19        rio_0.5.27          sjlabelled_1.1.8   
[10] snakecase_0.11.0    estimability_1.3    htmlTable_2.2.1    
[13] parameters_0.17.0   base64enc_0.1-3     gld_2.6.2          
[16] rstudioapi_0.13     proxy_0.4-26        farver_2.1.0       
[19] flexmix_2.3-18      ggrepel_0.9.1       lubridate_1.7.10   
[22] fansi_0.5.0         mvtnorm_1.1-2       codetools_0.2-18   
[25] splines_4.1.1       rootSolve_1.8.2.2   knitr_1.33         
[28] sjmisc_2.8.7        nloptr_1.2.2.2      broom_0.7.9        
[31] cluster_2.1.2       png_0.1-7           effectsize_0.6.0.1 
[34] compiler_4.1.1      sjstats_0.18.1      emmeans_1.6.2-1    
[37] backports_1.2.1     assertthat_0.2.1    Matrix_1.3-4       
[40] cli_3.0.1           htmltools_0.5.1.1   tools_4.1.1        
[43] coda_0.19-4         gtable_0.3.0        glue_1.4.2         
[46] lmom_2.8            Rcpp_1.0.7          carData_3.0-4      
[49] cellranger_1.1.0    vctrs_0.3.8         nlme_3.1-152       
[52] lmtest_0.9-38       insight_0.17.0      xfun_0.25          
[55] openxlsx_4.2.4      lme4_1.1-27.1       lifecycle_1.0.0    
[58] MASS_7.3-54         zoo_1.8-9           scales_1.1.1       
[61] hms_1.1.0           sandwich_3.0-1      expm_0.999-6       
[64] RColorBrewer_1.1-2  curl_4.3.2          Exact_2.1          
[67] gridExtra_2.3       rpart_4.1-15        latticeExtra_0.6-29
[70] stringi_1.7.3       bayestestR_0.11.5   e1071_1.7-8        
[73] checkmate_2.0.0     boot_1.3-28         zip_2.2.0          
[76] rlang_0.4.11        pkgconfig_2.0.3     purrr_0.3.4        
[79] labeling_0.4.2      htmlwidgets_1.5.3   tidyselect_1.1.1   
[82] magrittr_2.0.1      R6_2.5.0            generics_0.1.0     
[85] multcomp_1.4-17     DBI_1.1.1           pillar_1.6.2       
[88] haven_2.4.3         foreign_0.8-81      withr_2.4.2        
[91] abind_1.4-5         datawizard_0.4.0    nnet_7.3-16        
[94] tibble_3.1.3        performance_0.9.0   modelr_0.1.8       
[97] crayon_1.4.1        car_3.0-11          utf8_1.2.2         
[100] jpeg_0.1-9          grid_4.1.1          readxl_1.3.1       
[103] data.table_1.14.0   digest_0.6.27       xtable_1.8-4       
[106] stats4_4.1.1        munsell_0.5.0   

Help

Please contact [email protected] or [email protected] or [email protected] if you have any questions realted to the code.

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Code for Skill and core standardization: An experiment with Oldowan-like flaking systems

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