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Fix rsem #160

Merged
merged 2 commits into from
Oct 24, 2023
Merged

Fix rsem #160

merged 2 commits into from
Oct 24, 2023

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LMBradford
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A few fixes for issues that break the workflow when running RNA-seq data without defined batch variables.

Fixes #155
Fixes #159

@LMBradford LMBradford requested a review from mattjmeier October 24, 2023 14:31
@mattjmeier mattjmeier marked this pull request as ready for review October 24, 2023 14:41
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Great!

@LMBradford LMBradford merged commit 0a2e28e into main Oct 24, 2023
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@LMBradford LMBradford deleted the fix_RSEM branch October 24, 2023 14:49
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StudywideQC breaks if batch_var is null RSEM_make_index makes directory in wrong place
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