add ensemblIDs to biomarker file

R-ODAF · Jul 11, 2024 · 69b3590 · 69b3590
1 parent ef2a12b
commit 69b3590
Show file tree

Hide file tree

Showing 2 changed files with 66 additions and 66 deletions.
diff --git a/Rmd/tgx_ddi.Rmd b/Rmd/tgx_ddi.Rmd
@@ -232,7 +232,7 @@ log10ratios <- log2ratios %>%
 ```
 
 ```{r classifier}
-classifier_path <- file.path(params$projectdir, "resources", "Biomarker_TGx-DDI_Li2015_Tk6_with_IDs_PCA_and_training_set.txt")
+classifier_path <- file.path(params$projectdir, "resources", "tgx-ddi_biomarker-classifier_Li-2015.txt")
 classifier <- read.delim(classifier_path, sep = "\t")
 
 # Save the classifier IDs for later