TGx-DDI by ensembl IDs - Tempo-seq and RNA-seq (#251) #94

	name: Build and push a container to GHCR
	on:
	push:
	branches:
	- include_r_pkg
	- main

	permissions:
	contents: write
	packages: write
	jobs:
	build:
	runs-on: ubuntu-latest # self-hosted #
	steps:
	# add a step to reduce disk space on the runner
	- name: Reduce disk space
	run: \|
	sudo apt-get clean
	sudo rm -rf /var/lib/apt/lists/*
	sudo rm -rf /var/cache/apt/*
	sudo rm -rf /var/cache/debconf/*
	sudo rm -rf /var/cache/fontconfig/*
	sudo rm -rf /var/cache/gdm/*
	df -h
	- uses: actions/checkout@v4
	- name: Set up Docker Buildx
	uses: docker/setup-buildx-action@v3
	- name: Log in to GitHub Container Registry
	uses: docker/login-action@v3
	with:
	registry: ghcr.io
	username: ${{ github.actor }}
	password: ${{ secrets.GITHUB_TOKEN }}
	- name: Disk space before build
	run: df -h
	- name: Build and push container image to GHCR
	uses: docker/build-push-action@v5
	with:
	push: true
	output: true
	tags: ghcr.io/r-odaf/r-odaf_health_canada:r-pkg-test
	file: ./Dockerfile
	cache-from: type=registry,ref=ghcr.io/r-odaf/r-odaf_health_canada:cache
	cache-to: type=inline
	- name: Disk space after build
	run: df -h
	- name: Find large files and directories
	run: \|
	du -ah . \| sort -rh \| head -n 20

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