Merge pull request #91 from PolyPhyHub/cli-fix

Added support for configuring domain_margin from CLI
PolyPhyHub · May 22, 2024 · d325f9e · d325f9e
2 parents 78347fe + 6f008a1
commit d325f9e
Showing 1 changed file with 7 additions and 0 deletions.
diff --git a/src/polyphy/utils/cli_helper.py b/src/polyphy/utils/cli_helper.py
@@ -38,6 +38,11 @@ def parse_args():
             '--window-res-y',
             type=int,
             help="Y resolution of the main window")
+        parser.add_argument(
+            '-m',
+            '--domain-margin',
+            type=float,
+            help="Domain margin parameter")
         parser.add_argument(
             '-t',
             '--trace-res-max',
@@ -174,6 +179,8 @@ def parse_values(ppConfig):
             ppConfig.setter("agent_deposit", args.agent_deposit)
         if args.deposit_attenuation:
             ppConfig.setter("deposit_attenuation", args.deposit_attenuation)
+        if args.domain_margin:
+            ppConfig.setter("DOMAIN_MARGIN", args.domain_margin)
         if args.trace_attenuation:
             ppConfig.setter("trace_attenuation", args.trace_attenuation)
         if args.deposit_visualization: