included CI to verify and test the code flow in batch mode #2
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| name: Polyphy CI | |
| on: | |
| push: | |
| branches: [ "main" ] | |
| pull_request: | |
| branches: [ "main" ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v2 | |
| - name: Create /tmp/flag file | |
| run: echo "This is a flag file" > /tmp/flag | |
| - name: Install Python dependencies | |
| run: | | |
| python3 -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| - name: Run polyphy.py for 2D_discrete | |
| run: | | |
| python3 src/polyphy/polyphy.py 2d_discrete -b -n 100 -f data/csv/sample_2D_linW.csv | |
| - name: Run polyphy.py for 3D_discrete | |
| run: | | |
| python3 src/polyphy/polyphy.py 3d_discrete -b -n 100 -f data/csv/sample_3D_linW.csv | |
| - name: Check if 4 files are created in data/fits | |
| run: | | |
| file_count=$(ls -1q data/fits/*.npy | wc -l) | |
| if [ $file_count -eq 4 ]; then | |
| echo "Success: 4 files found in data/fits" | |
| else | |
| echo "Error: Expected 4 files in data/fits, found $file_count" | |
| exit 1 | |
| fi |