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PennChopMicrobiomeProgram / unassigner Public

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Put all db files in .unassigner/ by default#40

Merged

kylebittinger merged 6 commits intomasterPennChopMicrobiomeProgram/unassigner:masterfrom 38-allow-non-default-path-to-ltp-dataPennChopMicrobiomeProgram/unassigner:38-allow-non-default-path-to-ltp-dataCopy head branch name to clipboard

Nov 29, 2024

+36-33

Conversation Commits6 (6)Checks Files changed

Commits

Commits on Nov 19, 2024

Put all db files in .unassigner/ by default, add --db_dir option, remove --type_strain_fasta option
Ulthran
committed
Add back --type_strain_fasta for testing/backwards compatibility
Ulthran
committed

Commits on Nov 20, 2024

Deprecate --type_strain_fasta and move default db dir to ~/.unassigner/
Ulthran
committed

Commits on Nov 27, 2024

Three tiered handler for ltp_fp
Ulthran
committed
Expand user in default db_dir path
Ulthran
committed
Always make output dir
Ulthran
committed

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