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Default version, working directories, new script to filter contaminants #14
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This is usually used when you have a large number of contaminants in your sequencing data (e.g. p__Actinobacteria g__Propionibacterium) and you want to remove them and re-calculate the diversity measures and not screw up your linear models
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These two commits do a few things:
-Use qiime2-2019.4 version by default
-Uses a different way of setting up working directories for the various operations
-Adds a new script "filter_some_features.sh" that will remove contaminants you might have in your sequencing data