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Update README.md
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nebfield authored Aug 1, 2023
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Expand Up @@ -13,9 +13,7 @@ PGS Catalog. This is mostly used internally by the PGS Catalog Calculator ([`PGS
in 'long' format
* `match_variants`: Match target variants (bim or pvar files) against the output
of `combine_scorefile` to produce scoring files for plink 2
* `ancestry_analysis` : use genetic PCA loadings to compare samples to population reference panels, and report
* PGS adjusted for these axes of genetic ancestry. The PCs will likely have been generated with
* [FRAPOSA (pgs catalog version)](https://github.com/PGScatalog/fraposa_pgsc)
* `ancestry_analysis` : use genetic PCA loadings to compare samples to population reference panels, and report PGS adjusted for these axes of genetic ancestry. The PCs will likely have been generated with [FRAPOSA (pgs catalog version)](https://github.com/PGScatalog/fraposa_pgsc)
* `validate_scorefiles`: Check/validate that the scoring files and harmonized scoring files match the PGS Catalog scoring file formats.

## Installation
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